Xenopus laevis (African clawed frog): 108703950
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Entry
108703950 CDS
T01010
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108703950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108703950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108703950
Membrane trafficking [BR:
xla04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108703950
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108703950
Exosomal proteins of other body fluids (saliva and urine)
108703950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
AAA_13
Syntaxin_2
Lzipper-MIP1
Relaxase_C
GNVR
Baculo_PEP_C
YtxH
Lge1
DUF4658
TolA_bind_tri
Acyl-CoA_dh_2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
108703950
NCBI-ProteinID:
XP_018095751
UniProt:
A0A310U4Y0
A0AA97PYT8
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All DBs
Position
9_10L:complement(132812656..132847051)
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AA seq
288 aa
AA seq
DB search
MRDRTQELRSAKDSDDDEEIVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagggatcggacccaggagctgaggagcgctaaagacagcgacgatgatgaggagatt
gtgcaggtggaccgggaccattttatggacgaattctttgagcaggtggaagagatccgg
ggctgtattgagaagctgtcagaagatgtggagcaggtgaagaagcagcacagtgctatc
ctagctgcaccaaaccctgatgagaaaaccaagcaggagctggaggatcttactgccgac
atcaagaaaacggccaacaaagttcgctccaagttgaaagcaattgaacaaagcattgag
caggaggagggattgaatcgttcttcagctgatctgcgtatccgaaaaacccagcattct
actctgtcccgcaagtttgtggaggtgatgacagaatacaatgcaacgcaatccaagtac
agggatcgctgcaaggaccgcatccagagacagctggagatcactggaagaacaacaacc
aatgaagaacttgaggacatgttggagagtggaaagctggcaatattcacagatgatatc
aagatggattcccagatgaccaaacaagctctaaatgagatagagacaagacacaatgag
atcattaaactggagaacagtatccgggaactgcacgacatgtttgtagatatggccatg
ctggtggaaagccagggggagatgatcgaccgaattgagtacaacgtggaacactctgtg
gattatgtggaaagagcagtgtctgatacgaagaaagctgttaaatatcagagcaaagcg
cgaaggaagaagattatgataataatctgttgtgtagtactcggtgtagtcttggcttcc
tctatcggagggaccctgggactctga
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