Xenopus laevis (African clawed frog): 108707995
Help
Entry
108707995 CDS
T01010
Name
(RefSeq) septin-5 isoform X1
KO
K16943
septin 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108707995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707995
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108707995
04812 Cytoskeleton proteins [BR:
xla04812
]
108707995
Membrane trafficking [BR:
xla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
108707995
Cilium and associated proteins [BR:
xla03037
]
Motile cilia and associated proteins
Sperm associated proteins
108707995
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
108707995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
Ras
AAA_16
ABC_tran
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
108707995
NCBI-ProteinID:
XP_018101685
UniProt:
A0A8J0UCT0
LinkDB
All DBs
Position
2L:complement(42264642..42297635)
Genome browser
AA seq
635 aa
AA seq
DB search
MERSSSEETYSEAEDESQFQHFLRNDSEAELAGIIKGIGFDGSLHIEENSQSDQEQEKED
WLHNRQQQECGRIYNEHLEEERQNRRGQQQQEEESLCKEHQEEEILFREDQGGNLIRKQH
ENVRLHRDQFDEEERLRREYQEEKIRGEQYEEERLRREHQQDARLCSEQQEQKLRKQHLE
EVERIRRDHLRQPQAQHEDKRTIKEKFSQVDSDILPNMIRHIKEDVEEEDSWEDEDSSHS
LTVLPTKLCCPQALTPLSPSRPKSPWGRFDPYDSFEEDREYVGFATLPNQMHRKYVKKGF
EFTLMVAGESGLGKSTLINSLFLTDLYRDRHILSPEERVTQTVEIVKQTVDIQEKGVRLH
LTIVDTPGYGDAINNESCWKPAADYIDQQFEQYFRDESGLNRRNLQDTRVHCCLYFLSPL
GHGMRPMDIEFLRALQDKVNIVPILGKADSLTPTELQQKKQRIRDEIEKYGIRIYQFPEC
DSDEDEDFKQQDIQLKKSIPFAVIGANTIIEVNGRRVRGRMYPWGVVEVENEEHCDFIKL
RTMLIRTHMQDLKDVTRETHYENYRAQCIQNLTQRVVRERNRNKLTRESGTDFPIPSMPP
SPDHETQRLIREKDEELRRMHEVLQKMQRQIKDSQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagcagcagtgaggagacttatagtgaggcagaggatgagagtcagttccaa
catttcctgcgaaatgattctgaggcggagttggcaggcataataaagggtatcgggttt
gatggtagcttacacattgaagagaatagtcagagtgatcaggagcaggagaaagaagac
tggctccataacaggcagcaacaggaatgtgggagaatatacaatgagcatttggaggaa
gagaggcagaacagaagaggccaacagcagcaagaagaagagagtctatgtaaagaacat
caggaggaagaaatactctttagagaggatcagggaggaaatctcattaggaaacagcat
gagaatgtaaggctacacagggatcagtttgatgaggaggaaaggctccgcagagaatac
caggaagaaaagatccgtggggaacagtatgaggaggagaggcttcgcagagagcaccag
caagatgccaggctttgcagtgagcagcaagagcagaaactccgcaaacagcacctggaa
gaagttgaaagaatacgaagagatcatctaagacaaccccaagcacagcacgaggacaag
aggaccattaaggaaaagttctcacaagtggattctgatatcttgcctaacatgatcagg
cacattaaagaggacgtcgaagaagaggacagttgggaagatgaagattctagccacagt
ttgacagttctgcctacaaagctgtgttgcccccaagcactgactccactcagcccttct
agacccaagagtccatggggcaggtttgatccgtatgactcctttgaggaggacagagaa
tatgtgggatttgccacccttcccaaccagatgcacagaaaatatgtgaagaaaggcttt
gaatttactctcatggttgcaggagaatctggtctaggaaagtctacgctaattaacagt
ctgttcctaactgatctatatcgagaccgccacatactaagcccagaagaacgtgtcaca
caaacagtcgagatagtgaagcaaacagtggacatacaggagaaaggagtgcgactgcac
ctgacaatagtggatacaccaggctatggggatgctatcaataatgaaagctgttggaaa
ccagcggctgattatatcgaccagcaatttgagcagtatttcagggatgagagtggatta
aaccgcaggaatcttcaggacacgcgtgtacactgctgcctctacttcctgtcaccatta
ggacatgggatgagacccatggacatagaatttctgcgagctctacaggacaaagtgaat
attgtccccatcctggggaaagccgacagcctgacacctacagagctgcaacaaaagaag
caacggattcgagatgaaatagaaaagtacggaattcgaatttatcaatttccagaatgt
gactccgatgaagatgaagactttaaacagcaggacatacaactgaaaaaaagcattcca
tttgccgtcattggagctaataccatcatagaggttaatggcaggcgtgtaagaggccgt
atgtacccctggggtgttgttgaagtggagaatgaggagcactgtgactttatcaagctg
cgcactatgctgattcgcactcatatgcaggatctgaaggatgtaacaagagaaactcac
tatgagaactaccgtgcccagtgcatccagaatctgacacagcgagtggtgagggagaga
aatcgcaataagctgaccagagagagtggtacagacttcccaatcccaagcatgcctcca
tcaccagatcatgaaacacaaagacttatccgtgaaaaagatgaggagctgcggcgaatg
catgaggttctgcagaagatgcagaggcagataaaggactcacaataa
DBGET
integrated database retrieval system
