Xenopus laevis (African clawed frog): 108709323
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Entry
108709323 CDS
T01010
Symbol
rnf43.S
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108709323 (rnf43.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108709323 (rnf43.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108709323 (rnf43.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108709323 (rnf43.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108709323
NCBI-ProteinID:
XP_018104549
Xenbase:
XB-GENE-17331813
UniProt:
A0A974DJ09
A0A1L8H5W0
LinkDB
All DBs
Position
2S:32166901..32237255
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AA seq
664 aa
AA seq
DB search
MNRARLQLASLWLLLAVTRLQAVAASALGTTERDMDVKALIRVRAAQGNLTLEGLFARVA
EISPAEGKLLQFHPLSLCNTSEDDQTKPGFISIVKLETPDSDTQPCLSLANKARLAGERG
AHAILFDISNDRGALQQLQQPAGINQPVVLIWGPDAEKLMEVVNKNKEALVKIEVQEQPK
WLHHDVWILLTLSATVLFIILCAVARLRCRQPPPQDSIQQQTLVAISCLATRRYQQRVLK
EQRASGGRVDTASTSSSVPVCAICLEEFTDGQELRILPCCHEYHLICVDPWLRQNHTCPL
CMYDILDSGTSAQPPAHRTASQTPLWGRYPGSARLMSHLPPNGLPMVFPTPDNSIFLSRA
PYYLDQTHHWQTPEQMPMQIRTHRRGAECPRESGYLPDDPGSDSSSGPCHGSSSENCTDI
SLHCLHGTSSSSVHSSQSNQEDSSPPALASYLLPQSELPALNPLLSPQASYANHVHFHQH
RHHHYRRNSHRSKRRTKVSRADPGYYREQRHITGTNGESRSLMIRREPRPSCSRTCFDPR
TNREHIRHHQSMPQAASVVQGSSEPDVDTSLRPSRTDPPSRTYRKKKSSAPSHLPLLHSP
RHFHPANSVQVCESAQPRWAEEVRLLHSRVNSHRENTAMMHLYHPPHHNQGAREEMEAVC
EHAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcccggctgcagctggcatccctctggctgctgctcgcggtgactcgtctc
caggcagtggcggcttctgccttgggcaccacggaacgagacatggatgtgaaggcgctg
attcgggtgagagcggcgcaaggaaacctgaccttggaaggactatttgccagggtggca
gagattagcccggcggaaggaaaactactccagtttcaccccctgtctctgtgcaacacc
agtgaagatgatcagactaagcctggtttcatttccattgtcaaactggaaactcctgat
agtgatacccagccatgcctgtccctggccaacaaggctcggctggccggggagagagga
gcccatgctatactctttgatattagcaatgacaggggagccttacagcagctgcagcag
ccagctggcattaaccagcccgtggtcctgatctggggccctgatgctgagaagctgatg
gaggttgtgaacaaaaacaaagaggctctggtgaagatcgaggtgcaggagcagcccaag
tggcttcatcatgacgtctggatcctgctcactttgtctgccaccgtcttgttcattatc
ttgtgcgcagttgcccggcttcgctgcaggcagcccccaccacaggactccatacagcaa
cagactcttgtggctattagctgtctggctactagaaggtaccaacagcgggtgttaaaa
gaacagcgtgcaagcggtggtcgggtagatacagccagcactagcagttctgtgccagtt
tgtgccatctgcctggaagagttcacagatgggcaggagttgcgcatattgccgtgctgc
catgagtaccatctgatttgtgtggatccttggctgagacagaatcacacgtgtcccctc
tgcatgtatgatatactagacagtgggacctcagcacagcctccggctcacagaacagct
tcacagacaccgctgtggggaaggtacccaggctctgctcgtctcatgtctcacctgccc
cccaatggcttaccaatggttttccctaccccagataacagtatattcttgtcaagagct
ccatattacctggaccaaacccatcactggcaaacaccagagcaaatgccaatgcaaatc
cggactcatcgtcgaggagcagaatgtccaagagagtcgggctatttgcctgacgacccg
ggcagtgatagtagctcaggaccgtgccatggctcttccagtgagaactgtacagatata
agcctgcattgtttgcatggcacctcttcttcctctgttcacagctctcagagcaaccag
gaggattcttccccaccagcacttgcctcgtatctactacctcagagtgaactcccagca
ctgaaccctcttctgtctccccaggcttcctatgccaaccatgttcattttcatcagcat
cgtcatcatcactatcggcgaaactctcacagatccaagaggaggaccaaggtttctagg
gcagatcctggttattacagggaacaaagacatataactggaactaatggcgagtcaaga
tcacttatgattcgcagagagcccagaccttcatgttcaagaacttgttttgaccctaga
actaatagggagcacatcaggcaccatcagtccatgccacaggccgcttcagtagtgcag
ggctcaagtgaacctgatgtagacacctcccttaggccctcaagaaccgacccaccaagt
aggacttatagaaagaaaaaatcctctgccccttcacaccttccattgttgcacagcccc
cgacacttccacccagctaacagtgtccaggtgtgtgaaagcgcccaaccgcgatgggca
gaagaagttagacttctacattccagggtgaactcccatcgagaaaatacagcaatgatg
cacctatatcatccaccacatcacaaccaaggtgccagggaggagatggaagctgtgtgt
gagcatgcagtgtaa
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