Xenopus laevis (African clawed frog): 108713179
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Entry
108713179 CDS
T01010
Symbol
lum.S
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108713179 (lum.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108713179 (lum.S)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_6
LRR_9
LRR_5
FNIP
Motif
Other DBs
NCBI-GeneID:
108713179
NCBI-ProteinID:
XP_018111513
Xenbase:
XB-GENE-17333707
UniProt:
A0A974DB16
A0A1L8GUS2
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Position
3S:92098131..92107135
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AA seq
353 aa
AA seq
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MHLHFIPFFAVLISGILCTFYDYGYDGGYAAPEGDYYVSSLSLGPSTANCAPECTCPFNY
PSAMYCDNRKLKTIPMIPAGIQYLYLQSNLIEAIEEDAFKNVTELKWLILDHNQLTNAKI
KKNAFSSLKHLVKLYISFNNLTELVGPLPKTMDDLHVTNNKISKITPNILEGLENLTHIH
LQHNALKEDSISGAFKGVKQLSYLDLSFNELTKLPKGLPPSITTLYFDNNKIANIPDEYF
QGFKSLQYLRLSHNKLKDAGVPGNAFNISSLVELDLSFNELGSIPAVNEGLENLYMQVNK
IQKFTLNSFCKVIGPLEYSKIRHLRLDGNNISRIDLPQDMYSCLRVASEIDLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcattttattccattctttgcagtgctaattagtggcattttatgcacattt
tatgactatggttatgatggaggatatgctgccccagagggagattactatgtctcaagt
ttatctttgggaccatctactgcaaactgtgctccagaatgcacctgtccttttaactat
ccctctgcaatgtattgtgacaaccgcaaattaaagacaatcccaatgattcctgctgga
atacaatacttatacctgcaaagcaacttgattgaggctatagaagaggatgcttttaag
aatgttactgaattgaaatggcttattctagaccacaaccagttgaccaatgcaaaaata
aagaaaaatgctttttccagtctaaaacatctagtaaaattatatatcagctttaacaac
ctaactgaactggtagggccactgccaaaaactatggatgatcttcatgtaaccaacaat
aaaatctcaaagattactcctaacattttggaaggtctagagaatttaactcacatacat
ctgcagcacaatgctctaaaagaagattctatttcaggggcattcaaaggagtgaaacag
ctttcatatcttgaccttagttttaatgaactgacaaagctacccaagggacttcctcca
agcataactactttatattttgacaacaataaaattgctaatatcccagatgagtatttc
caaggtttcaaatctctgcagtatcttcgcctgtcccacaacaaattgaaagatgcaggt
gtacctggtaatgctttcaatatctcaagtcttgttgagttggatctttcattcaatgaa
cttgggagcattccagctgtgaatgaaggtctggaaaacctctacatgcaagtaaataaa
attcaaaaattcaccctgaacagcttttgtaaagttattggaccattggaatactccaaa
atcagacaccttcgtttagatggaaacaatatcagcagaattgacctaccacaggacatg
tacagctgtctccgcgtggccagtgaaatagacctaggttaa
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