Xenopus laevis (African clawed frog): 108714346
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Entry
108714346 CDS
T01010
Symbol
tnn.L
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108714346 (tnn.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108714346 (tnn.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
108714346 (tnn.L)
Glycosaminoglycan binding proteins [BR:
xla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108714346 (tnn.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
DUF4998
REJ
EGF
I-EGF_1
DUF1389
Motif
Other DBs
NCBI-GeneID:
108714346
NCBI-ProteinID:
XP_018113965
Xenbase:
XB-GENE-6486909
UniProt:
A0A974D3W3
A0A1L8GML9
LinkDB
All DBs
Position
4L:93531526..93569831
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AA seq
1091 aa
AA seq
DB search
MDIIMSFWPALVFLLSAPPYLLTSAAAIKTTKIDDCSSEKGLTFTHVYSSPGEENEKLQT
VQSDEQNLVFRHYIHLQTPAADCEKNKQLNDLLSRLQALESEMKELKEKCDGCCGGAGGC
SNCNGHGKFDPKLGSCQCDEGWEGDDCATKSCPNNCAGNGRCIDGICQCAQGYSGPDCSE
KVCPFDCGKYGTCVDGSCKCEEGFSGPACRKKKCPFDCGEYGTCVDGICQCSEGYTGPAC
RKKKCPVDCGEHGKCIDGSCKCSEGYRGVDCKEKKCAIDCGPNGRCVDGQCICNDGFMGS
SCSIEIASLCSGHGKYQMDTGGCQCDDGWEGTDCSQRNCPNNCDNNGVCVDGVCQCFSGY
TGLDCSNKECPFDCGEHGTCVDGSCKCSVGYTGLTCREEDCIVGCGENGRCDGGQCFCEE
GFTGETCSEVIAVQNLQLLSVTEDSLNIAWDMMLEVDYYLLVYYPMGNEGLKKEIQVSVD
QDTYQIMGLAAGTEYKVLMYHAKNGMTSQPAELLAKTDSISLGTLWVAEETEDSLEVEWE
NPLVNVDHYKLKYAEQPNGAERELIVSQSQDPKSRYTITGLQPSTSYKISVQTVRSGQEG
KPATAVGTTGIDGPKNLVTTKVGEDTASLSWKASLADIDKYMLSYSSPDGSTEEISLGKE
KISTSLSNLTPGTEYIFYLWAEKDAKRSKRTSVTAVTEIDPPKNLQFSDSQQQASLTWNP
PIAQIDGYVLVLEDSDGGRQEIELDSAVNNFELKDLKKGLKYTVYLLAFKGNRRSIQVST
NFYTDIDPPTNLQSIDVTQTEASLTWTPPTAQIDGYILTYTDADGNTEEIQLDSSSRSFA
LKNLKKGLKYTVYLKAFKGDRRSSQASTIFHTVAIIITHPSDCSQVQQSGNRQSGVYTIY
PAGDPTKGVRAYCDQETDGGGWTVFQRRSSGKLDFYQRWRTYVEGFGDPSDEFWLGLEWI
HKMTSSPATNYEIRVDLRSGDESVYALYRTFRVGTSRDRYKLSIGDYSGTAGDALTYHNG
WKFSTWDKDNDIALTNCALSHRGAFWYKNCHLANLNGQYGGTGHSQGVNWEPWKGHEFSI
PFAEMKMRPKA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggacattattatgtctttctggccagctctggtgtttcttttgtctgcacccccttat
ctgctgacttctgctgctgctataaagactaccaaaatcgatgactgtagcagcgagaaa
ggcctcacatttacccatgtatacagcagccccggggaagagaatgagaagcttcaaaca
gtgcagtcagatgagcaaaatcttgtatttagacattatatccatctccaaacccctgca
gcagactgtgagaaaaacaagcaacttaatgacctgctgtccagactacaagctttagaa
tcagagatgaaagaattaaaggagaagtgtgatgggtgttgtggaggagcagggggctgc
agtaactgcaatggacatggaaagtttgatccaaaattaggttcttgtcagtgtgatgaa
ggctgggagggggatgactgtgctacaaagagctgccctaacaactgtgcagggaacggg
cgatgtattgatggtatttgccagtgtgcccaaggctatagtgggccagactgcagtgag
aaggtgtgtccctttgattgtggtaagtatggaacatgtgtggatggctcctgcaagtgt
gaagaagggttctctggcccagcatgtagaaagaaaaaatgcccctttgactgtggtgaa
tacgggacttgtgttgatggtatctgccagtgctcagaagggtacactggcccagcatgc
agaaaaaagaagtgtcctgtagactgtggagaacatggaaagtgtatagatggatcctgc
aaatgttcagaaggatacaggggcgtggactgcaaagaaaagaagtgtgctattgactgt
ggccccaatggccgatgtgttgatggacaatgcatttgcaatgatggtttcatgggaagc
agctgttccatagaaatcgctagtctctgcagtggacatggcaagtaccagatggacact
ggtggttgtcaatgtgatgatggctgggagggaacagactgctcacaaagaaattgtcca
aataattgtgacaataatggggtatgtgttgatggagtatgccagtgctttagtggttac
actggcttggactgcagtaacaaggagtgtccgtttgattgtggagagcatggcacttgt
gttgatggctcttgcaagtgctcagttggatacaccgggttgacttgcagagaagaagac
tgcattgtcggttgtggtgaaaatgggcgctgtgatggcggccagtgcttctgtgaggag
ggatttactggggaaacttgttctgaagtgattgcagtgcagaatttacaattgctcagt
gttacagaggattccctgaacattgcttgggatatgatgcttgaagttgattattacttg
cttgtatattaccccatgggcaatgaaggcttaaagaaggaaatacaagtatctgtggac
caggatacataccagatcatgggtttggctgccgggactgaatataaagtactgatgtat
catgcaaagaatggaatgaccagccagccagcagagctccttgccaaaacagatagtatt
tcactggggactctgtgggttgcagaagagacagaagactctttggaagtagaatgggaa
aatcccttggtaaatgtggatcattacaaactgaagtatgctgagcagcctaatggggct
gagagagagcttatagtgtcacagagtcaagaccccaagagcagatacaccatcacaggt
ctgcagcctagcacatcctacaaaatcagcgtccagactgtcagaagtggtcaggaggga
aagccagctactgcagttgggactacagggattgatggtcctaaaaatctagtgaccaca
aaagtgggtgaggatacagccagtctatcctggaaagcatccctagccgacatagataaa
tatatgttgagctattcatcgcctgatggcagcactgaagagatatctttaggcaaagag
aaaatttcaacgtctctgagtaacctaactcctggcacagaatacattttttatctatgg
gcagaaaaagacgccaaacggagcaagagaaccagtgtcacagcagtgactgaaattgac
ccaccaaagaatctacaattttctgattcacaacagcaagcctctctcacctggaatccc
cctattgcacaaattgatggctatgttttagtcttggaagactctgatggaggcagacag
gagattgagttggattctgcagtaaataattttgaactgaaagatctgaagaaagggcta
aagtacacggtctacctgctagcttttaaaggtaaccgtcggagcatacaagtcagcacc
aacttttatacagatattgaccccccaacaaacttacaatctattgacgttacacagact
gaagcctccctcacatggactccacccactgcacagatagatggctatatactcacttat
actgatgcagatggcaacactgaggagatccagctggattcttcaagtagaagttttgct
ctgaaaaacttgaagaaaggattaaagtacacagtttacttgaaagctttcaaaggagat
cgcaggagcagccaagccagtaccatatttcatacagtcgccattatcatcacccaccca
tctgactgcagtcaagtccaacaaagtggaaatagacaaagtggcgtatacactatctat
ccagctggtgatcctacaaaaggagtcagagcctactgtgatcaggagactgatggtgga
ggatggactgtctttcagagaagaagcagtggaaagctcgacttttaccagcgatggagg
acttatgtggagggatttggtgatccaagtgatgaattctggcttggtctcgagtggatt
cataaaatgacttcatctccagcaacaaactatgaaatacgtgtagatctgcgttctggg
gatgagtcagtctatgctttgtaccgcactttccgggtgggaacttccagagataggtat
aagctgtccatcggtgactactctggcactgcaggcgatgcacttacatatcacaacggc
tggaagttcagtacatgggacaaggataatgacattgcactcactaactgtgccctctca
catcgtggagccttttggtataaaaactgtcaccttgccaacctgaatggacaatatgga
ggaaccggtcacagccagggcgtaaactgggaaccatggaaaggacatgagttttctatt
ccctttgctgaaatgaagatgcgtcccaaggcctaa
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