Xenopus laevis (African clawed frog): 108717036
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Entry
108717036 CDS
T01010
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108717036
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108717036
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Motif
Other DBs
NCBI-GeneID:
108717036
NCBI-ProteinID:
XP_018119244
UniProt:
A0A1L8GAG6
A0A974CY52
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Position
5L:123244099..123253508
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AA seq
313 aa
AA seq
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MEELTAFVSKSFDHKIKEKKEMITYREVLESGPARGKESGCGEGAREDGLAGTRCIGGGG
GGGGGGGGGGARSPVLELDLSVERIRETGSPKLTEVSPEMKERKEELKQQALEEESQTKI
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ
ENQLHKGVLIGAGSQFEACRVAPYVNVGALRMPFQQDSHCNVPSLSFQVQAQLQLDSAVA
HAHHHLHPHLTAHAPYMMFPAPPFGLPLATLAAETATAASVVAAAAAAKTSSKNSSIADL
RLKAKKHAAALGL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttactgcttttgtatccaagtcatttgatcacaagatcaaggagaagaaa
gagatgatcacttaccgggaggtgctggaaagcggcccggcgcggggcaaggagtctggc
tgcggagaaggggcccgtgaggacggactagccgggacccggtgtataggagggggcggc
ggcggtggaggaggaggaggtggtggaggggccagatccccggttctggagctcgatctg
tccgtggagaggatcagggagactggaagcccgaagcttactgaggtctccccagagatg
aaggagcggaaggaggagctgaagcagcaggcgctggaggaagagagccagactaagatc
aagcagagaaggagtcggactaactttaccctggagcaactgaacgaactggagagactg
tttgatgagacccactaccccgatgccttcatgagggaggagttgagccagcgcctgggc
ctgtcagaggccagagttcaggtttggtttcaaaacagaagggcaaaatgtagaaaacaa
gaaaatcagctccataaaggggtcctgataggagcagggagccaatttgaagcgtgtaga
gtcgcaccttatgtcaatgtgggagccctgaggatgccatttcagcaggatagtcattgc
aacgtgccatccttgtccttccaggttcaggcgcagttacagctggacagcgccgtggct
cacgcacaccaccacctgcatcctcacctgacggcgcatgcgccctacatgatgttcccg
gctccacccttcggactcccactggcgaccctggctgcggagacggcgacggctgcgtct
gtagttgcggctgctgcggctgctaaaacctccagcaagaactcgagcattgcagatctt
agacttaaagccaaaaaacatgcagcagctctgggactgtga
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