Xenopus laevis (African clawed frog): 108718918
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Entry
108718918 CDS
T01010
Symbol
satb1.L
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108718918 (satb1.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
108718918 (satb1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
108718918 (satb1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108718918 (satb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
RuvA_C
Motif
Other DBs
NCBI-GeneID:
108718918
NCBI-ProteinID:
XP_018122925
Xenbase:
XB-GENE-17338947
UniProt:
A0A8J0VGF3
LinkDB
All DBs
Position
6L:complement(46528329..46652529)
Genome browser
AA seq
749 aa
AA seq
DB search
MDHSNETTQGIEHSEMSNNVNDPKGPPAKIACLEQNGSPLGGRARLGSTGGKMHGVPLRH
SSQLLRTNIRKGNMIPVFCVVEHYENFIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSLG
YSHNAAAQAKGLIQVGKWNPVPLSCVTDAPDATVADMLQDVFHVVTLKIQLHSCPKLEDL
PPEQWSHITVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRW
YKHFKKTKEMMADIEDLSELSQQSTNHVNYGQQPGPVGTPEKPSSPVQISHSSQPPVRTP
LPNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQQSLNQQYLNHPPPVSRSINK
PLEQQLSPNTEVSSDIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTAS
QSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASTMGPAPLISTPSSRPSQVKTTTI
ATERNGNLENCTMNINASIYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDPS
PENRTLWENLSMIRRFLSLPQPERDVIYEQESNAVHQHSERPSHVIHVSAEQIQQQQQQQ
PQPPGPRLPPRQPTVASPAESEEENRQQSRPRTKISVEALGILQSFIQDVGLYPDEEAIQ
TLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKDNSGLEVDVADYDDDELPKDSEENTQDKS
TSTLFPVKLEEDFPGKGNTDITAEMKDLS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcgaacgagacaactcaggggatagaacattcggaaatgtctaacaatgta
aacgatccaaagggtccaccagccaaaatagcctgccttgagcagaatggcagtcctcta
ggaggaagagcaagacttggaagcacaggaggaaaaatgcatggagtgccacttagacat
tcttcacaactgttaaggacaaatattcggaaaggaaatatgattccagtgttctgtgtg
gtggaacattatgagaacttcattgaatatgactgcaaagaagaacatgctgaatttgtt
ttggtcaggaaagacatgctttttaaccaactgattgaaatggctctgctatctcttgga
tattctcacaatgcagccgcccaggccaaagggctaatccaagttggaaagtggaatcca
gttcccctctcctgtgtgacagatgcccctgatgccacagtagcagacatgttgcaggat
gttttccatgtggtcacactgaaaatacagctacacagttgtcctaaactagaagacttg
cctccagagcagtggtcccacataacagtcagaaatgctctaaaggacttactgaaagat
atgaaccagagttcgctggctaaggaatgtcccctttcacagagtatgatttcttccatt
gtgaacagcacttactatgcaaatgtttcagcagcaaaatgtcaagaatttggaaggtgg
tataaacatttcaagaagacaaaagagatgatggcagatattgaagatttatcagaactg
tctcaacaaagtaccaatcatgttaactatggtcagcagcctggtcctgttggtactcca
gaaaagccttcatccccagttcagatttctcacagtagtcaaccacctgtgcggacgcca
cttcccaatttgcatccaggacttgtttctactcccatcagccctcagttagtaaatcag
cagctggtaatggctcagttactgaaccagcaatatgctgtaaacagactactcgcacag
cagtccttaaaccaacagtacttgaaccatcctcctcctgtcagtagatcaatcaacaag
cctttggagcaacagctttcgcccaacacagaagtgtcttccgatatctaccagtgggta
cgtgatgaattaaaacgagcaggaatctcgcaagcagtatttgcacgagtggctttcaac
agaactcagggcttgctctctgaaatactgcgaaaggaagaagatcccaagaccgcatca
caatccttacttgtaaatcttagagcaatgcagaatttccttcagctgccagaggctgag
cgtgaccgtatatatcaggatgaaagggaaagaagccttaatgcagcgtcaaccatgggc
ccagcacctttgataagcacaccatccagtcgcccgtcacaggtgaagacgactaccatt
gcaacagagcggaatgggaacctggaaaactgcacgatgaatattaatgcttccatttat
gatgaaatccagcaggaaatgaagagagcgaaagtatcccaggctctgtttgcaaaggtt
gcagcttctaaaagccagggctggctgtgtgaactattacggtggaaagaagacccttcc
ccagaaaacaggactctatgggaaaacctttcaatgatacgaaggttccttagtcttccc
caaccagaaagagatgtgatttatgagcaagagagtaatgcggttcatcagcacagtgaa
aggccatctcatgtgatccatgtttctgctgaacagattcagcagcagcaacaacaacaa
ccacagcctcctggtcccaggctacccccaagacagcccacagttgcatctccagctgaa
tccgaggaagaaaatcgccagcaatcccggccacgaacaaagatctctgttgaggccctg
ggtattttgcagagcttcatacaagatgtagggctttaccctgatgaagaagctatccaa
acactgtccgcacagcttgacctacccaagtacaccattattaagtttttccagaatcag
agatactatctcaagcaccacggaaagctgaaagacaattctggcctagaagttgacgtg
gccgattatgacgacgacgagttgcctaaagattccgaagagaatacacaggacaaaagt
actagtacactgtttccagttaaacttgaagaggatttccctgggaaaggaaatacagat
atcactgctgaaatgaaagacttatcataa
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