Xenopus laevis (African clawed frog): 398118
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Entry
398118 CDS
T01010
Symbol
crx.L, crx, crx-a, crx-b, crx.S, otx5, otx5-b, otx5b, Xotx5
Name
(RefSeq) homeobox protein otx5-B
KO
K09337
cone-rod homeobox protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398118 (crx.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
398118 (crx.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
398118
NCBI-ProteinID:
NP_001081916
Xenbase:
XB-GENE-865179
UniProt:
Q9PT61
A0A9U5BBK2
A0A974H8A1
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All DBs
Position
8L:complement(70907385..70916939)
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AA seq
290 aa
AA seq
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MMSYIKQPHYAVNGLTLAGTGMDLLHSAVGYPTNPRKQRRERTTFTRAQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQAKPRPAKKKTSPARETN
SEASTNGQYSPPPPGTAVTPSSSASATVSIWSPASISPIPDPLSAVTNPCMQRSTGYPMT
YSQAPAYTQSYGGSSSYFTGLDCGSYLSPMHPQLSAPGATLSPIATPTMGSHLSQSPASL
SAQGYGAASLGFTSVDCLDYKDQTASWKLNFNATDCLDYKDQSSWKFQVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacatcaaacagcctcattatgcagtcaatggactaaccttagctggtact
ggaatggaccttctgcactcagctgtaggatacccaacaaacccacggaaacaaagaaga
gagagaacaacttttaccagggcgcagctggatattttggaatccctctttgctaaaaca
cgttaccctgacatttttatgagggaggaggtggctctaaagataaatttaccagaatcc
cgagtgcaggtctggtttaaaaacagaagggcaaaatgtcgccagcaacaacagcagagc
actggacaagctaagcctcgaccagctaagaagaagacatcccctgccagggagacaaac
tcagaggcaagcaccaatgggcagtacagtcctcctcctcctggcactgcagttacccct
agttcctcagctagtgcaacagtgtccatatggagtccagcctccatttccccgattcca
gatcctctctctgctgtgactaatccctgcatgcagaggtcaactggctacccaatgacc
tatagtcaggcccctgcttatactcagagctatggaggatcttcatcttatttcacaggg
ctggactgtggatcctatctgtctcctatgcacccacaactctctgctcctggtgccacc
ttgagcccaattgccacacctacaatgggtagccacctcagccaatctccggcatccctt
tctgcccagggatatggagctgccagtcttggcttcacctcagtggattgcttagactac
aaggaccaaactgcttcatggaagcttaatttcaatgccactgactgccttgattataaa
gaccagagctcatggaaatttcaagtcttgtaa
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