Xenopus laevis (African clawed frog): 444261
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Entry
444261 CDS
T01010
Gene name
apaf1.L, apaf-1, apaf1
Definition
(RefSeq) apoptotic peptidase activating factor 1 L homeolog
KO
K02084
apoptotic protease-activating factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04210
Apoptosis
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
444261 (apaf1.L)
04115 p53 signaling pathway
444261 (apaf1.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
444261 (apaf1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
ANAPC4_WD40
CARD
WD40_like
Ge1_WD40
BBS2_Mid
CARD_2
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
444261
NCBI-ProteinID:
NP_001085834
Xenbase:
XB-GENE-988971
UniProt:
Q6GNU6
LinkDB
All DBs
Position
3L
AA seq
1248 aa
AA seq
DB search
MDEKARSLLLQNRTALVRDIRTAYIMDHMISDQVITPEEEARVKAQHTQVDKANFLINLI
LGKGKQAYVSFYNALLHEGYKDLALLLKEAANAEHSDSTKSSSNGITSYVQTVLCEGAVP
QRPVVFVTRPKLVTKIQQSLYKLNVESGWVTVYGMAGCGKSVLAAEVLRDHKILTECFPG
GVHWVSVGKQDKSGLLMKLQNLCTRLDQEAKYSQRPPLNAEEARERLRLMVNRMYPRCLI
VLDDVWDSWVLKAFDIQCRVLITSRDKSVTDSLSGFKEAVRVDSELEHSKGLEILSRFLS
LKAEELPSQAHSIIKVSKGSPLVVSLIGALLREFPTRWDFYLTQLKRKQFKRIRKSSSYD
YEALDEAMSISVDNLKEDFREYYNDFSIIEKDVKLPTQVLCILWDMEREDVEDMMQEFVN
KSLIYCDRNGKSFSYYLHDLQLDYLTERNRDRLTVLHAKLVDQYKKHYSSKLPTVEQEDC
VYWYHYLAYHMAKANLHQDLCSLLFSLNWLKAKSELFGTSHLIHEFVQYRNILDNQNAKA
REHFQEFIAVNGHLLGLNPDISIVQLGLGQAEDSEVYKQAILQAKEELKSGVLYVNWINK
QRMKNLPTLVVRPHKDAVFHACFSPDGRKFASCGADKTLQVFRSETGEKLLELEAHDDEV
LCCAFSADEKLLATCSADRKVKIWNAKTGKPIRVYEEHTEQVNCCQFTNGLSAPLLATCS
NDCFIMLWDSETEYSRNTLIGHTGAVYHCRYSPDDRYLASSSMDGSLKIWDVESANEEKS
IEVAKLFENEDESQPEVLLKCCAWSNDGSRIMVTTRNFLCIFDSTSCDLLSQLKACHQIL
YCDFCTTNQIVALALSHYVVQLWDIDSSTKIADFNAHLSWVHCVKFSPKSSSFLTSSDDQ
TVKLWETSNVSKPSATNLKREFDVSFNGEETLVLATSKDDCILLINGMTGETLSQINTQD
KCVTCCCLTNDYQLAAIGDRDGKVKVIDVSRGEILCKLDGHSATVQHCQFTADGKHLVSS
SDDSTIRVWSLASGESLELRGHKEPVKFFKILQESQVFSWSFDGTVKVWDLITGKLRKEF
ICHSETVLSCDISPDSTKFSTASADKSAKIWSLDMSTLLHELNGHQSCVRCCRFSWDNKY
LATGDDNGKIMIWSVQNGELLKQCCDISVNNENSLHDGWVTDLHFSPNSKLIVSSGANVK
WWDVDTGACKQTFYTVGTNLKSIHLCPTFRTFVTIDNLGILYVLKLIE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaaggctcgaagtctgttgcttcagaatcgaacagcgctggtgagggacatt
cgcacagcttacatcatggaccatatgataagtgatcaggtcattaccccagaggaggaa
gctcgagtaaaagctcagcacactcaggtggacaaagcaaatttcctcatcaatttaatt
cttggaaaaggcaagcaggcatatgtttctttttataatgctctgcttcacgaggggtac
aaagaccttgctcttcttcttaaagaggctgctaatgctgagcattctgacagtaccaag
agctcaagcaatggaattacttcatatgttcaaaccgtactctgtgagggagctgtacct
cagagaccagttgtgttcgtcacacggccgaagcttgtcactaagatacaacagagcctg
tacaagttgaatgtggaatctggctgggtaaccgtgtacgggatggctggctgcggaaag
tctgtcttggctgcagaagtacttcgagaccacaaaatactaactgaatgttttcctgga
ggagttcactgggtctctgttggaaagcaagacaaatccggactccttatgaaactacaa
aatttgtgcacccgcctagatcaggaggccaagtattcacagagacctccattaaatgct
gaagaagccagggaaagactgaggttgatggtgaatcgaatgtaccctaggtgcctcata
gttttggatgatgtttgggattcctgggtactcaaagcttttgatattcagtgtcgagtg
ctcattaccagcagagacaagagtgtgactgattcactttctggttttaaagaggctgtc
cgtgtagacagtgagcttgagcattcaaaaggccttgaaatcctctcacgctttctgagt
ttaaaagcagaagaactgccatcccaggcccatagcataattaaagtatccaaaggttct
cctcttgtagtatctctgataggagctctgctacgagaatttcccacccgttgggatttc
tacctcactcagctgaagagaaagcaatttaaaagaatacgaaagtcttcctcctatgat
tatgaggctcttgacgaagcaatgtcaataagtgtggataatctaaaagaagactttaga
gagtactacaatgatttctccattatagaaaaggacgtgaaattgcccacacaggtttta
tgtatcctatgggacatggaacgtgaggatgtggaagacatgatgcaggagtttgtcaac
aagtccttaatatactgtgatcgtaatggaaagtccttttcatattatttacatgatctc
caactggattatctcacagagaggaaccgggacagactgaccgttcttcacgccaaactt
gttgaccaatataaaaaacattattcaagtaaattacctactgtggagcaagaggattgt
gtgtattggtatcattacctagcctaccacatggccaaggccaatttacaccaagatctt
tgctcactcttgttttccctgaactggttaaaagctaaatcagaattgtttgggacatcc
cacctcattcatgaatttgtacagtatcgaaatattctggataatcagaatgcaaaagca
cgagaacattttcaagaattcattgctgtgaatggtcatcttcttggattgaatcctgac
attagtattgtgcagctgggccttggtcaggctgaagactctgaagtctacaaacaagct
attttgcaagccaaagaagagctcaaatctggagtgctctatgtcaactggataaacaag
caaaggatgaagaatctgccaacattggtggttcgtccacataaagatgctgttttccat
gcctgcttttctcctgatggacgaaaatttgcttcttgtggagctgataaaactttacag
gtcttcagaagtgaaacaggagagaaactccttgaattagaagcacatgatgatgaagtg
ctgtgttgtgcattttctgctgatgaaaagcttctagccacctgttctgcagacaggaaa
gtgaagatttggaatgccaagacgggaaaaccaataagggtgtatgaggagcatacagaa
caagtcaactgctgccagttcaccaatggactttcagcaccactgcttgccacatgctcc
aatgactgcttcatcatgctgtgggactctgagacggaatatagccgtaacactcttatt
ggacacacaggcgcagtctaccattgcagatattcacctgatgatcgatatctagccagt
tcctctatggatggttcattaaagatttgggatgtggagtctgcaaatgaggagaaatca
attgaagttgctaagctttttgaaaatgaagatgagtcacagcctgaagtgctgcttaaa
tgttgcgcttggtcaaatgatggttcaagaattatggtaaccactcgcaatttcctttgt
atttttgattctacgagctgtgaccttttgtctcaactcaaggcctgtcatcagatcctt
tactgtgacttctgcactactaatcagattgtagcgcttgctttgtcacactatgttgtt
cagctgtgggacatagattcgtctacaaagatagctgacttcaatgcacacctgagctgg
gttcactgtgtgaaattttctccaaaaagttcttcattcctgacatcttctgatgaccag
actgtgaagctttgggagactagtaatgtgagcaaaccatcagccactaacttaaagcgt
gagtttgatgtgtccttcaatggcgaggaaacactggttcttgcaactagtaaagatgat
tgtatactgctaattaatggaatgactggagagactttatcacagatcaacacacaggac
aaatgtgttacgtgctgctgtctcacaaacgactaccaactagcagctatcggggataga
gatggtaaagtaaaggttatagatgtatccaggggtgaaatcctctgtaaactggatggt
cacagtgctacagtccagcactgccagttcactgcagatggaaaacaccttgtttcaagc
tctgatgattccactattagagtctggagcttggcatctggagagagtttggaattacgt
gggcacaaagaacctgtgaaatttttcaagattttgcaagagtcacaagttttttcttgg
tcctttgatggaacagtcaaggtatgggacctcatcactggaaagctcagaaaagagttt
atttgccattctgagacagttctatcttgtgatatttcacctgactccaccaaattttca
actgcctctgctgataaaagtgccaagatatggagcttagatatgtctaccctcctccat
gaattgaatggacaccaaagctgtgtacgatgctgtcggttttcatgggacaacaagtat
ttggcaactggtgatgacaacggtaaaattatgatttggagtgtgcagaatggagagctg
ctgaaacagtgttgtgacatatctgtcaataatgaaaatagtctgcatgatggttgggtg
acagatctacacttctctcccaacagcaagctaattgtatcctctggggcaaatgtcaag
tggtgggatgtggatactggagcctgcaaacagacattctacacagttggcacaaatctc
aaatcaatccacttatgtcctacttttagaacctttgtaacaattgacaatctgggaatt
ctgtacgtgctgaagctaatagagtga
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integrated database retrieval system
