KEGG   Xenopus laevis (African clawed frog): 446650
Entry
446650            CDS       T01010                                 
Symbol
rpa3.S, repa3, rpa3
Name
(RefSeq) replication protein A3 S homeolog
  KO
K10740  replication factor A3
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03030  DNA replication
xla03420  Nucleotide excision repair
xla03430  Mismatch repair
xla03440  Homologous recombination
xla03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    446650 (rpa3.S)
   03420 Nucleotide excision repair
    446650 (rpa3.S)
   03430 Mismatch repair
    446650 (rpa3.S)
   03440 Homologous recombination
    446650 (rpa3.S)
   03460 Fanconi anemia pathway
    446650 (rpa3.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xla03032]
    446650 (rpa3.S)
   03400 DNA repair and recombination proteins [BR:xla03400]
    446650 (rpa3.S)
DNA replication proteins [BR:xla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    446650 (rpa3.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     446650 (rpa3.S)
   MMR (mismatch excision repair)
     446650 (rpa3.S)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     446650 (rpa3.S)
SSDB
Motif
Pfam: Rep_fac-A_3 Cyt-b5 DUF1344
Other DBs
NCBI-GeneID: 446650
NCBI-ProteinID: NP_001086815
Xenbase: XB-GENE-17339932
UniProt: Q6AZP5 A0A974CIK6
LinkDB
Position
6S:complement(27268566..27274654)
AA seq 121 aa
MADMFDASKVRINSSMLAQNVGSPVCFVGRVDKVHPTGTSIVLSDGAGKNATVEFNEPLE
EEISGIIEVIGKVTPKATIMGVSYFPFRDDVSTFDLALYDEALKIIHEFPQYYPFGHSAN
E
NT seq 366 nt   +upstreamnt  +downstreamnt
atggctgatatgttcgatgcttccaaggtccgcattaacagcagcatgctggctcagaat
gtgggcagtcccgtgtgcttcgttggccgggtagataaggttcacccaactgggacatcc
attgttctatcagacggggcaggcaaaaatgctacagttgagtttaatgaaccgctggag
gaggagatttctggaattatagaagtaattggcaaagttacaccaaaagcaacaatcatg
ggagtatcttatttcccatttcgggacgatgtaagcacttttgatctggccctctatgat
gaagcactaaaaataatccatgaatttcctcagtactatccctttgggcacagtgcaaat
gaatga

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