Xenopus laevis (African clawed frog): 446650
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Entry
446650 CDS
T01010
Symbol
rpa3.S, repa3, rpa3
Name
(RefSeq) replication protein A3 S homeolog
KO
K10740
replication factor A3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03030
DNA replication
xla03420
Nucleotide excision repair
xla03430
Mismatch repair
xla03440
Homologous recombination
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
446650 (rpa3.S)
03420 Nucleotide excision repair
446650 (rpa3.S)
03430 Mismatch repair
446650 (rpa3.S)
03440 Homologous recombination
446650 (rpa3.S)
03460 Fanconi anemia pathway
446650 (rpa3.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
446650 (rpa3.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
446650 (rpa3.S)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
446650 (rpa3.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
446650 (rpa3.S)
MMR (mismatch excision repair)
446650 (rpa3.S)
DSBR (double strand breaks repair)
HR (homologous recombination)
446650 (rpa3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Cyt-b5
DUF1344
Motif
Other DBs
NCBI-GeneID:
446650
NCBI-ProteinID:
NP_001086815
Xenbase:
XB-GENE-17339932
UniProt:
Q6AZP5
A0A974CIK6
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All DBs
Position
6S:complement(27268566..27274654)
Genome browser
AA seq
121 aa
AA seq
DB search
MADMFDASKVRINSSMLAQNVGSPVCFVGRVDKVHPTGTSIVLSDGAGKNATVEFNEPLE
EEISGIIEVIGKVTPKATIMGVSYFPFRDDVSTFDLALYDEALKIIHEFPQYYPFGHSAN
E
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatgttcgatgcttccaaggtccgcattaacagcagcatgctggctcagaat
gtgggcagtcccgtgtgcttcgttggccgggtagataaggttcacccaactgggacatcc
attgttctatcagacggggcaggcaaaaatgctacagttgagtttaatgaaccgctggag
gaggagatttctggaattatagaagtaattggcaaagttacaccaaaagcaacaatcatg
ggagtatcttatttcccatttcgggacgatgtaagcacttttgatctggccctctatgat
gaagcactaaaaataatccatgaatttcctcagtactatccctttgggcacagtgcaaat
gaatga
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