Xenopus laevis (African clawed frog): 447233
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Entry
447233 CDS
T01010
Symbol
supt3h.L, supt3h
Name
(RefSeq) SPT3 homolog, SAGA and STAGA complex component L homeolog
KO
K11313
transcription initiation protein SPT3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
447233 (supt3h.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
447233 (supt3h.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
447233 (supt3h.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
447233 (supt3h.L)
STAGA complex
447233 (supt3h.L)
TFTC complex
447233 (supt3h.L)
SAGA complex
447233 (supt3h.L)
SLIK complex
447233 (supt3h.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-18kDa
CBFD_NFYB_HMF
Hit1_C
DUF6279
Motif
Other DBs
NCBI-GeneID:
447233
NCBI-ProteinID:
NP_001087409
Xenbase:
XB-GENE-955792
UniProt:
A0A8J0Q045
Q6AX62
LinkDB
All DBs
Position
5L:159379833..159687222
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AA seq
376 aa
AA seq
DB search
MSLGVAGPNIMALAGTSSSSGRGIGKMTSFVPELQSMMFSLGDARRPLHETAVLVEDIVH
TQLINMLQQAAEVSQMRGARVISAEDLLFLMRRDKKKLRRLLKYMVFRDYKSKILKGIEE
DDVEEKFNSNNNSNKRQKLAQDFLISIDQTGELLALMEDDEVDDVKQERMERAEKQTRGM
DSTQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNAVAMEILAYLAYESVAQLVDLAL
LVKQDMAPKTCDPFTHAMSAAYIQSRNTAELLAQTAPLKSNPDTPENTPPATPNPPSVVA
QHQGKGLAGALGNGVDSKTKQRKRKKSAAAGGIEANSDAIQPSHIREAIRRYSHKIGPLS
PFTSAYRRTGMPFLAC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcggcgttgcagggcccaacataatggcattggccggcacatcatcatcatct
ggaagaggaatagggaagatgaccagctttgttcccgagctccagagcatgatgttctcc
ttgggtgatgcccgccgcccgttacatgaaaccgctgtcctggtggaagatattgttcac
acacagcttatcaatatgttgcagcaggcagccgaagtgtcccagatgaggggtgcgcgg
gtcatttccgctgaagatctccttttcctcatgcgtcgggataagaagaaattacggagg
ttgctgaaatacatggtcttccgtgactacaagtccaagatcttgaaaggaatagaagaa
gatgacgttgaagagaaattcaacagcaacaacaattccaacaaacggcaaaagctggcg
caagactttctcatctccatcgaccagacaggagagcttctagccctgatggaagatgat
gaggttgatgacgttaaacaggaacggatggagagagcagagaaacaaacccgagggatg
gactcaacacaatatgctgaattctgtgagagccggcagctgagcttctctaaaaaggcc
tctaagttccgagactggctcgactgcagcagcatggagatcaagcccaatgctgtagcc
atggagatcttggcttacttggcctatgagtctgtagcccagttagtggatctggccctt
ttggttaaacaagatatggctcccaagacttgtgacccattcacacatgcaatgtccgct
gcctacattcagagccgcaatacagctgagttgcttgctcagacagcaccactgaagagt
aacccggacacgccagagaatacaccgccagccacccccaaccctccctctgttgtagct
cagcaccagggtaagggcctagctggagctcttggaaatggtgtagactccaaaaccaag
cagaggaaaagaaaaaagagtgcagctgctggtgggatcgaggcaaacagtgatgccatc
cagcccagccacatcagagaggcgatccggcgctacagccacaagattggcccgctctcc
ccattcacgagcgcttaccgcaggaccgggatgccttttttagcctgttaa
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