Xenopus laevis (African clawed frog): 496097
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Entry
496097 CDS
T01010
Symbol
rexo2.L, rexo2, smfn
Name
(RefSeq) RNA exonuclease 2 L homeolog
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
496097 (rexo2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
496097 (rexo2.L)
03009 Ribosome biogenesis [BR:
xla03009
]
496097 (rexo2.L)
Messenger RNA biogenesis [BR:
xla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
496097 (rexo2.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
RNases
496097 (rexo2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
496097
NCBI-ProteinID:
NP_001088822
Xenbase:
XB-GENE-994558
UniProt:
A3KNF3
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All DBs
Position
7L:78218731..78227771
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AA seq
186 aa
AA seq
DB search
MAKDMGQRMVWVDLEMTGLDIEKDEIIEMACLITDSNLDILAEGPNLIIKQPDELLDGMS
DWCKEHHGKSGLTQAVRESRITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKY
MPRFMRHLHYRIIDVSTVKELCRRWHPVEYRLAPKKAASHRALDDIRESIKELQFYRESI
FKTKTD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggacatgggccaacggatggtgtgggtggacttggagatgactggcctagat
atcgagaaggacgagatcattgagatggcatgcctcataactgattctaatcttgatatt
ctggcagaaggtcctaatttgattattaagcagccagatgaactattggacggcatgtct
gattggtgcaaagagcaccatgggaagtctggtcttacccaagcagtcagagagagtcga
ataacattacaacaagctgagtatgaatttctttcattcatcaggcaacacacacctccg
ggagtctgcccattagcaggaaattcagtgcatgcagataagaaatttctggataaatat
atgccacggtttatgagacacttgcattaccggatcattgatgtgagcactgtgaaagaa
ttgtgcagacgctggcatcctgtagaatatagacttgctcctaaaaaggcagcttcacat
agagccctggatgatatcagagagagcatcaaggaactgcagttttatagggaaagcatt
ttcaagacaaaaacagattaa
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