Xiphophorus maculatus (southern platyfish): 102216387
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Entry
102216387 CDS
T02923
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X4
KO
K16797
zinc finger protein GLI1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102216387 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102216387 (gli1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
102216387 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
102216387
NCBI-ProteinID:
XP_005797051
Ensembl:
ENSXMAG00000017965
LinkDB
All DBs
Position
20:12718823..12777120
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AA seq
1485 aa
AA seq
DB search
MPVDMQPHQGLYYYETSPSQPSRGIVPSDQSPYSDVSPLRVLHLDGPPQDCHTMYNPMTP
SMAHGSGSGPVQGNSHCLDQYMRPPQALPLHNMMGHRGMPPTEGSNSAPYCNQNNMMSSH
PNFCQLQPSSEQIGSGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLV
AFVNSRCNPNGASSYGHLSVSAMSPSLNYSSNINCHSRQQGSIYGGNSGTPLGVHTPGPC
QASRLPPHNPRLLVPPKHGHLKTEPGLVGVMDGMNVKNLEERSEGDVASPSSTGTQDHLM
GLLDGRDDLDKEDGKPEPEAIYETNCRWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCH
WQECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPY
VCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEA
HITKKHRGDTGPRPPGSALTSGGQTSELLLEKEETCREDCKLLAPETALKSQPSPGAQSS
CSSERSPLGSTNNNDSGVEMNLNAAGSLDDLTALEDGVAGGGSGGGGELGTMGMSAQALK
RLENLKIDKLKQIRRPTPPGRCASNKLPAISGSGDNMGMCAPSPLNRRVMELSNHELGAG
NIANSTNDRRGSGTSSLSSAYTVSRRSSMASPYLSSRRSSDVSQIGGTAGGGCHLLSPEQ
AGGDPLSPETYRRGAPCPGGGGLPGLPNLTPAQHYSLKAKYAAATGGPPPTPLPNMEQSG
TPVRRGGPLSEYQGQPLPPFLQQGGPRRHSANTEYGTGVIYPHQAPGNNTRRASDPVRSV
ADPQALPKRFNSLNNVAMMGRRNALQLRSSDTGLSRHMYSPRPPSITENVMMEAMGMEPH
LNTVDPRDRSMMMTPVERNFMSFQQQNQTMGGGGPLPNQLSPSHDSLGCPDPAYIQRHYQ
GHGGEVISRASGNPLSQARPTQPDGMSNTLLQQAEYGMSTCQLSPSGPHYPGIGQGSDSG
GPWNDNHNQIQTSSHAIQNQQSVRFSDSSLQPQQTQAHFNNQTALYNNSDGTHKPFIKPE
QQFHPGMGGGDACQSAKLQQQRILLQQTQTYPQQSGQVLMRNSGHPSCDFQGQNPGSYPS
GGGLSLGCAGSALSEGQRSETPMMQVKEMMVRNYVQSQQALMWEQQQEQEQQSGIKPTSL
SDNMGLNAQAAMMQHSPEHQNQNLYPSQMYSSYPEHNLVMSPAAHSRGSTSVTPKDQHLT
GLQGTCYNQEMVVPRPPQGRKPLSRQNSLPQVGGGYLGGSPHLSPVHSTSSPRRGVRLPP
VQHPQHPQNEMFSPSNNNNNNMYYTGQINMNMEKHRDPQNGPCLNQPTNMGPPNLDPAGD
TKSAPMAPYPESGPISNALENLDLENARIDFTSIIDEADSSSFSPVNNPLQGLPGSSSQA
SSRLTTPQTSVSLTPGTGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacatcaggggctgtattactatgagacctcacccagccag
ccctccagaggcattgtgccatcggaccagtctccctacagcgatgtgtctcccctccga
gtcctgcacctcgacggccctccccaggactgccacactatgtacaatcccatgactccc
agtatggctcatggatctggatcaggtccggttcagggaaacagccactgcttggatcaa
tacatgaggcctcctcaggcccttccactgcacaatatgatgggccacaggggcatgcct
cctacagagggtagcaatagcgccccctactgcaaccagaataacatgatgtcgtcacat
cccaacttctgtcagcttcagcccagctctgagcagatcggctctggtgacggctcaaga
ttctccacacctcgctctatgttgaagctgagtaaaaagagagccctgtccatctcacct
ctgtctgatgccagtgtagacctgcagaccgtcattcggacctcgcccaactcgctcgtg
gccttcgttaactctcgctgtaaccccaatggagccagctcctatggtcatctgtctgtg
agcgccatgagcccatctctgaattattccagcaacattaactgccactccagacagcaa
gggtcgatatacggaggaaacagtggcacacctctgggtgttcacacaccaggtccgtgc
caagcttcccgtttaccgccccacaatccccgactcctcgttccacctaagcatggacat
ctgaaaacagagccaggtctggtaggcgtgatggacggcatgaatgtaaagaacctggag
gaaaggtcagagggagatgtagccagtccttcctccaccggcactcaggatcatctgatg
ggcttgctggatggcagagacgacttggacaaggaggacgggaagccggagccggaggcc
atctatgagaccaactgtcgctgggagagctgcaacaaggagtttgacacacaagaccaa
cttgtacatcacataaacaatgagcacatccacggagagaagaaggaatttgtctgtcat
tggcaggagtgttctcgagagcagcggccttttaaagctcagtatatgctcgtggttcac
atgcgcagacacacaggagagaagccgcacaagtgcacttttgaaggctgtaataaagcc
tactctcgcctggagaatttgaagacccacttgcgctctcacaccggggagaaaccatat
gtatgtgaacatgaagggtgcaataaagccttctccaacgcttcagaccgggccaagcac
cagaaccgaactcactccaatgagaaaccatatgtttgtaagatccctggttgcactaag
cgatacacagatccaagctctttgcgtaagcacgtgaagacagtacatggccctgaagcc
catatcaccaagaagcatcgtggagacacaggcccacgaccccctggctcagctctgacc
tctggaggccaaacatcggagctgctcctcgaaaaggaggagacatgcagggaagactgc
aaattgttggcacctgagactgccctgaagtcccagccaagtcctggtgctcagtcgtct
tgcagcagcgaacgttctccactggggagcaccaataacaatgacagtggcgtggaaatg
aacctaaatgcagcaggaagcttggatgatctcacagctttagaggatggagttgcaggt
ggaggaagtggtggaggaggggagctaggaacaatgggaatgtctgcgcaggctctgaag
cggctggagaacctgaagattgacaagctaaagcaaattcgaaggccgactcctcctggc
cgctgtgccagtaacaagcttcctgccatttctggttcaggggacaacatgggaatgtgt
gcaccttctccacttaatcgacgagtaatggagctgtccaaccacgagctcggagctgga
aatatagcaaactctactaatgacaggagaggaagtggtacaagcagcctgagctcagca
tacacagtgagccgtcgctcctctatggcatccccttacctatctagtagacgctccagt
gatgtctcacaaataggagggacagcagggggcggctgtcacctcctgagtccagaacaa
gctgggggcgaccctctttcacctgaaacctatcgtagaggagctccatgtcccggaggt
ggagggttaccaggtctccccaacttaacacctgctcagcactacagcctgaaggccaaa
tatgctgcagccactggcggacctccacccactcctttacctaacatggagcagtctggt
accccagtaagaagggggggtcctttgagtgagtaccaagggcagcctttacctcctttt
ctccagcaaggaggtcctcggcggcacagtgccaacacagaatacggtactggagttatc
taccctcaccaggctccaggcaacaacaccaggcgggccagtgatccggttagatcagta
gcagacccacaagctctacccaaacgctttaacagcctcaataatgtggccatgatgggc
cgcagaaatgcactacaacttcgtagctctgacacaggtctttcccgccacatgtactcc
ccacgtccacctagcatcacagaaaatgtaatgatggaagccatgggtatggagccccat
ctcaacactgttgatcccagagatcgttccatgatgatgacccctgtagagagaaacttt
atgagtttccagcaacagaatcagacaatgggaggtggaggtccacttccaaaccagctg
tccccgagccatgactctctgggctgcccggatcccgcttacatacagcggcattaccag
ggacacggaggagaagtcatatccagagcaagtgggaatccattaagtcaagcaagacct
acacagccagatgggatgtcaaatactcttctccaacaggctgagtatggcatgagcacc
tgccagctgagtccttccggtccacattacccaggcataggtcagggcagtgacagtggg
ggtccttggaatgacaaccacaaccaaatccaaacttcaagccatgcaattcagaaccag
caatcggtgcggttctcagattccagtttgcagcctcaacaaacacaagctcacttcaac
aatcagacagccctctacaataattctgatggcactcacaaacctttcattaagcccgag
caacagtttcaccctggtatgggtggtggagatgcctgtcagagtgcgaagctccaacag
caacgaatcctcctgcagcaaacacagacttacccccaacagagtggtcaagtgttgatg
agaaactctggccacccaagctgtgattttcaagggcagaacccaggttcgtaccctagt
ggaggtggcttaagtttgggctgtgccggttctgcgctgtcagaaggccaaaggtcagaa
accccaatgatgcaggtgaaagagatgatggtgaggaattatgtacagtctcagcaagca
ctcatgtgggagcaacaacaagagcaagagcagcagagtggaataaaaccaacttctctt
tctgacaacatgggtttgaatgctcaagcagcaatgatgcaacacagcccagagcaccag
aatcagaacctgtatcccagccagatgtattcctcttaccctgaacataatctggtaatg
agccctgctgcccacagccgagggtccacctcagttacacctaaagatcagcacctgaca
ggtctccagggtacatgctacaatcaggaaatggttgtgcccaggccgcctcagggacgc
aagcctctcagccgccagaatagtctaccacaggtaggagggggttaccttggcggttcc
ccccacctgagccctgtacactccacttccagccccagacgaggggtgcgacttccacct
gtccagcatccacagcaccctcaaaatgaaatgttttctccctccaacaacaacaacaac
aacatgtactatacaggtcagataaatatgaatatggaaaaacacagggacccccagaat
ggaccttgccttaaccagccgaccaatatgggaccaccaaacctggacccagcaggtgac
accaagtctgcccctatggctccctatccagagtctggtcccatctcgaatgccttagaa
aacctggacttggagaatgctcgcattgactttacttccatcatcgatgaagctgattct
tcctcatttagtccagtcaacaatcctcttcaaggtcttccaggatcatcctcccaggct
tcttcacgcctcaccaccccacaaacgtccgtcagcctgactccaggcactggcctgtcc
aacatggctgtgggtgatatgacatccatgcttacctcactggctggggaaaataagtac
ctgaacactctgtcttag
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integrated database retrieval system
