KEGG   Xiphophorus maculatus (southern platyfish): 102218232Help
Entry
102218232         CDS       T02923                                 

Definition
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    102218232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102218232
Enzymes [BR:xma01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102218232
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102218232
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 102218232
NCBI-ProteinID: XP_023185362
Ensembl: ENSXMAG00000007976
LinkDB All DBs
Position
24
AA seq 1107 aa AA seqDB search
MLRTIFEAECSLSPTEGILGKEQSLEVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRV
DHHHQQQQQVSSLSPPGQLSPSSLGGSGGGGGGGGGGVVAASVREQQLQQELLALKQKQQ
IQRQILIAEFQRQHEQLSRQHEAQLQEHIKQQQELLALKHQQELLEHQRKMENHRLEQEL
EKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNQGGLPNDAPYW
YRKTQHSSLDQSSPPQTAVSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSER
RSSPLLRRRDSPITTAKKRSLDMADSACSSAPGSGPSSPNNSSNNIPNENGITVSISNNM
EASLAQRLCGGGDQGSINQLSLYTSPSLPNITLGLPATATATAASNVTSAQDAGLQPALS
LSPPFLSGGHLSPYLADSGSGGHGAHSPLLQHMVLMEQSPAQSPLVTGVSGMSMSSASMA
KLQRQHRPLGRTQSAPLPQGSAAQAHAQALALQQLVVQQQHQQFLEKHKQQFQQQQLHLN
KMMGKPGESPVGRQHQSHPEETEEELREHQDAGALPPGVTIKQEPPDPQELQELQELQEE
ALQQHREREQELLFRQQALLLEQQRIHQLRNYQASMEAAGMSMSFPGHRPLSRAQSSPAS
ASSFPISVPTQDPPVKPRFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETG
LRAQCECIRGRKAALEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSD
TIWNEVHSSSAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVA
IAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYDDPNVLYMSIHRYDDGNFFPGSGAPDE
VGSGPGVGFNVNVAFTGGLDPPMGDSEYLTAFRSVVMPIADEFAPDIVLVSSGFDAVEGH
PPPLGGYTLTSKCFGYLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLGQELDP
LPKAVLEQRPNPNAVRSLERVIETHSKYWRSVHRYSSRLGLSLLEAKRGDSEEAEAVSAM
ASLSVANTNTMDQSRTEEEPMEEEAPL
NT seq 3324 nt NT seq  +upstreamnt  +downstreamnt
atgctgcggaccatatttgaagcagaatgttctctttctcccacagagggaatcctgggg
aaggagcagtcgctcgaggtcctcaagacgtcggcgctcaaccacatcccaacagtggac
attaactctgcgctgcccctgcgtctgccccctgctgccatccccatggacctgcgcgtt
gatcaccaccaccagcagcagcagcaggtgtcgtcactctccccgccaggccagctctcc
cccagctccctgggaggatcgggtggcggtggcggtggcggtggcggcggtgtggtggcg
gcctcggtgcgcgagcagcagctgcagcaggagctgctggctctgaagcagaagcagcag
atccagaggcagatcctgatcgccgagttccagcggcagcacgagcagctgtcccgccag
catgaggcccagctccaggagcacattaagcagcaacaggagctgctggccctgaagcac
cagcaggagctgctggagcaccagaggaagatggagaaccaccggctggagcaggaactg
gagaagcagcagagggagcagaagctgcagctgctgaagaacaaggagcggggccaggag
agtgctgtggccagcaccgaggtgaagatgcgtctgcaggagttcgtcctgaacaagaag
aaggcgctggcccagcggagcctcaaccagggtggcctccccaacgacgccccctactgg
taccgaaaaacccaacatagctctctggaccagagctcgcctccacaaaccgcagtgtcc
acctacaatcacccggtgctgggcgtctacaaccctcgggatgacttcccactgcgaaag
accgcctcggagcccaacctgaagctgcgctcccggctgaagcagaaagtgagcgagcgc
cgcagcagcccgctgctccgccgcagagacagtcccatcactacggccaagaagcgctcc
ctcgacatggcggactcggcatgcagcagcgcccccggctccggccccagctccccgaac
aacagctccaacaacatccccaacgagaacggcatcactgtgtccatctccaacaacatg
gaggcgtctctggcccagcggctgtgcggcggcggcgatcagggctccatcaaccagctg
tctctctacacctcgccgtccctccccaacatcaccctggggctgccggccactgccacc
gccaccgccgcctccaacgtgacttccgctcaggatgcaggcctgcaaccagccctctcc
ctcagccccccctttctgtccggcggccatttgagcccctaccttgcagatagcgggtcc
ggcggccacggcgctcacagccccctgctgcagcacatggttctgatggagcagagtccc
gctcagagcccgctggtgacaggcgtaagcggcatgtccatgtcatcggcctccatggcc
aagctgcagcggcagcaccggcccctggggcggacccagtcggcgccgctgccccagggg
agcgccgcccaggcccacgctcaggccctggccctgcagcagctggtggtgcagcagcag
caccagcagttcctggagaagcacaagcagcagttccagcagcagcagctccacctcaac
aagatgatggggaagcctggcgagtcgcccgtggggcggcagcaccagagccacccggag
gagacggaggaggagctgagggagcaccaggacgccggggccttgccaccgggggtcacc
atcaagcaggagccgccggacccacaggagctgcaagagctgcaagagctgcaggaggag
gcactgcagcagcaccgcgagcgggagcaggagctgctcttcagacagcaggctctgctg
ttggagcagcagcggatccaccagctgaggaactaccaggcgtccatggaggctgccggc
atgtccatgtccttccctggacacagacccctgtccagggcgcagtcgtctccggcctcg
gcgtcgtccttccccatcagcgtccccacgcaggatcctcccgtcaagcctcgcttcacc
acaggcctggtgtatgactccctgatgcagaagcaccagtgcatgtgtggaaacaccaac
agccacccggagcacgccgggcgcatccagagcatctggtcccggctgcaggagaccgga
ctccgagctcagtgcgagtgtatccgtgggaggaaggccgctctggaggagctgcagacg
gtccactctgaagcccacgtcctgctgtacggaaccaacccactccggcagaaactcgac
tgttccataacgcccatgttcgttcggctgccgtgcggaggagtgggggtggacagcgac
accatctggaacgaggtccactcgtccagcgcggctcggctcgccgtcggctccgtcgtg
gagctggtcttcaaggtggcaaccggagagctaaagaacggttttgcggtggtccgccct
cctggacaccacgccgaggaaagcacccccatgggcttctgctacttcaactcggtggcc
atcgcggccaaactgctgcagcagagactcagcgtcagtaagatcctcatcgtggactgg
gatgttcaccatggcaatggcacccagcaggccttctacgacgaccctaatgtcctctac
atgtctatccatcgctacgacgacggcaacttttttccaggaagtggagcacccgatgag
gtggggagcggtccaggggtggggtttaacgtcaacgtggccttcaccggaggcctggac
ccccccatgggagactcagagtacctgactgccttcaggtctgtggtgatgccgatagcc
gacgagttcgctccagacatcgtgctggtctcctctggcttcgatgccgtggaaggacac
cccccaccgctgggcggctacaccctgacctccaaatgttttgggtatctgaccagacag
ctgatgaccctcgctggaggccgggtggtcctggcgctggagggaggtcacgacctcact
gcgatctgtgatgcctctgaggcctgcgtggccgccctgcttggacaagagctagatccg
cttccaaaggccgtcctggagcagaggcccaaccccaacgcagtgcgctctctggagaga
gtcatagagactcacagtaagtactggcgctcggtgcatcgttactcatcgcggctggga
ctctctctgctggaggccaagcgaggcgactcggaggaggccgaggccgttagcgccatg
gcgtctctgtctgtagccaacaccaacacaatggatcaaagcaggactgaggaggagccc
atggaggaggaggctccgctgtaa

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