KEGG   Xiphophorus maculatus (southern platyfish): 102219457
Entry
102219457         CDS       T02923                                 
Symbol
polr2e
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03020  RNA polymerase
xma03420  Nucleotide excision repair
xma04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102219457 (polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102219457 (polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102219457 (polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102219457 (polr2e)
   03400 DNA repair and recombination proteins [BR:xma03400]
    102219457 (polr2e)
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102219457 (polr2e)
  RNA polymerase III system
   RNA polymerase III
     102219457 (polr2e)
  RNA polymerase I system
   RNA polymerase I
     102219457 (polr2e)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102219457 (polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 102219457
NCBI-ProteinID: XP_014326960
Ensembl: ENSXMAG00000012010
UniProt: A0A3B5R456
LinkDB
Position
9:complement(20621551..20624565)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaggaggaaacttacaggctgtggaaaatccgcaaaaccatcatgcagctc
tgccatgacagaggctatttggtgacgcaagacgagttggatcagactctggaggagttc
aagagtcagttcggagacaaacccagcgaaggtcgacccagacgtacagaccttacagtg
ctggtggcacataatgatgatcccacagaccagatgtttgttttctttcctgaggaaccc
aaagtggggataaagaccatcaagatgtactgccagcggatgcaggaggagaacatcact
agagccatcattgtggttcagatgggcatgacgccctcggccaagcagtctctagtggac
atggcacccaagtacatactggagcagtttctgcagcaggagctgcttattaacatcaca
gagcatgagcttgttcctgagcacatcgtcatgacaaaagaggaagtgactgaacttcta
gccagatataagttaaaggaaagccagttaccaaggatacaggccggagaccccgtggct
cgctactttggattgaagagaggacaggttgtgaaaatcatccggcccagtgaaactgct
ggcaggtacatcacctacaggctggtccagtga

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