Xiphophorus maculatus (southern platyfish): 102219835
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Entry
102219835 CDS
T02923
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04110
Cell cycle
xma04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102219835 (smc3)
04114 Oocyte meiosis
102219835 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102219835 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xma00535
]
102219835 (smc3)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102219835 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
102219835 (smc3)
Proteoglycans [BR:
xma00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102219835 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
OmpH
AAA_29
Lysis_col
MFD_D3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102219835
NCBI-ProteinID:
XP_023189754
Ensembl:
ENSXMAG00000006978
LinkDB
All DBs
Position
5:23599995..23629324
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSTKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKVSAMKEEREQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEMNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELAELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKETLARSDDLDGLVDKTEAEIKEHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGEGSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaaacaggtcattatccaggggttcagaagttatagggatcaaactgttgtg
gacccctttagtcccaagcacaatgtgatcgtcggcagaaatggatctggaaaaagtaac
tttttctatgctatccagtttgtgcttagcgatgaattcagccacctgcgacccgaacag
cgcctggccttgcttcatgaaggaactggtccacgtgtcatttcagcttttgtggagatt
atatttgataactctgacaaccggctgccgatcgacaaagaggaggtctcccttcgccgt
gtcatcggcgcgaagaaggaccagtacttcttggacaagaagatggtgactaagaatgac
gtcatgaaccttctggagagcgccggcttctctcgcagtaacccatactacattgtcaag
cagggaaagatcaaccaaatggccacagcgcccgattctcagcgactgaagcttctgaga
gaggtggcaggaacgcgagtgtacgacgaacgaaaggaggagagtatttctctcatgaag
gagacggagggaaagcgagagaagatcaatgagctgctgaagtacatcgaggagcgtctg
cataccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agagctctggagtacaccatttacaaccaggagctgaacgaaactcgcgccaaactagat
gagttgtccaccaagagagagacctgtggagacaaatccagacaactgcgtgacgctcag
caagacgctcgggacaaagtagaggagacggagcgcgttgtgcgcgagctgaagtccaag
gtctctgccatgaaggaggagagagagcaactgtcgtcggagcgccaggagcagatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggatgagctggcaggcaacagc
gaacagaggaaacggctgctgaaggagcgacagaagctgctggagaagatcgaggagaag
cagaaggagctccaggagaccgaacccaaattcaacatggtgaaggaaaaggaggagcgg
ggcatctctagactggctcaagctacccaagagaggactgacctgtatgccaagcagggc
cgcggcagtcagttcacctccaaagaggagagggataagtggatcaagaaggagttgaag
tcgctggaccaggccataaatgacaaaaagaggcagattgcagccatccacaaagacctg
gaggacacggagatgaacaaggagaagaacctggagcagtacaacaaacttgatcaagat
ttaaatgaggtgaagacccgggttgaagagctggacaaaaaatattatgaagtgaagaac
aagaaagatgaactccaaagtgaaagaaactacctgtggcgggaggagaacgcagagcaa
caggccctggcagccaagcgagaggacttggagaagaagcagcagctcctccgagctgct
acaggcaaggccattctgaacggtatcgacagcataaacaaagtattggagcattttagg
aggaaggggattaatcagcatgtcatcaatggttaccatggcattgtcatgaataatttt
gagtgcgagccagctttttacacctgcgtggaagtgacagcagggacacgactgttttac
cacattgtggaaacggacgaagtgagcacaaaaatcctcatggagtttaacaaaatgaac
ttacccggagaagtgaccttccttccactcagcaagctggacgtcagagacaccgcctac
ccagaaaccaatgacgccatccctatgatcagcaagctgcgctacagtccaaactttgac
aaggcctttaagcacgtgtttgggaagacgttgatttgtcgcagcatggaggtttccacc
cagctggcccgagctttcaccatggactgtataactctagagggagaccaggtgagccac
agaggagcgctgacgggaggttactatgacaccaggaagtctcgcctggagctgcagaag
gacatgaggaaggccgaggaggagctggccgagctggaggccaagctcaacgagaacctg
cggaggaacatcgaacgtatcaacaacgagatcgaccagctgatgaaccagatgcagcag
atcgagacgcagcagaggaagtttaaggcctccagggacagcatactgtcagagatgaag
atgctgaaggagaagaggcagcagtctgagaagaccttcatgcccaagcaacgtagcctc
cagagcctggaggccagcctccacgccatggagtccaccagggagtcgctgaaggccgag
ctcggcaccgatctcctctcccagctcagcctggaggaccagaggcgtgtcgacgacctc
aacgacgagatccgtcagctacagcaggacaacaggcagctgttaaacgagaggatcaag
ctggagggaatcatgacccgagtagaaacgtatctcaacgagaacctgaggaagcgtctt
gatcaagtcgagcaggagctgaatgagctgcgtgagacagagggcggcacggttctcacg
gcgaccacgtctgagctcgacggcatcaacaaacgagttaaagagactttggctcgatca
gatgacctggacggtctcgtcgacaagacggaagcagagatcaaggagcacataaagagc
atggagcggtggaagaacatcgagaaggagcagaacgacgccatcaaccacgacaccaag
gagctggagaaaatgaccaacaggcagggcatgctgctcaagaagaaggaggagtgcatg
aagaagatcagagaactgggctccctgcctcaggaagcctttgagaagtaccagaccctc
acactcaaacagctcttcaggaagctggagcagtgcaacacggagctgaagaagtacagc
cacgtcaacaagaaggccctggatcagttcgtcaacttctccgagcagaaggagaagcta
atcaagcgtcaggacgagctggatcgtggctacaaatccatcatggagctcatgaacgtg
ttggagctgcgcaaatacgaggccatccagctcacctttaagcaggtgtcgaaaaacttc
agcgaggtttttcagaaactcgtcccgggaggcaaagccacgctggtgatgaagaagggc
gacgccgaaggcagccagtcccaggacgagggagaggggggagaaggcagcgagagggga
tccggatcccagagcagcgttccttcggtggaccagttcacaggagtcggcatcagagtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctgtccggaggtcagaag
tctctggtggctctggctctgatttttgccatccagaagtgtgacccagctcctttctac
ttgttcgatgagatcgaccaggccctcgacgcccagcacaggaaggctgtgtcagacatg
attgtggagctggccggccacgctcagttcatcaccaccaccttcaggccggagctgctg
gagtcggcagacaagttctacggagtcaaattcaggaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagactttgtggaggacgacaccacccatggttaa
DBGET
integrated database retrieval system
