Xiphophorus maculatus (southern platyfish): 102222228
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Entry
102222228 CDS
T02923
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03320
PPAR signaling pathway
xma04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102222228
03320 PPAR signaling pathway
102222228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102222228
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102222228
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102222228
Nuclear receptors [BR:
xma03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102222228
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102222228
NCBI-ProteinID:
XP_023195819
Ensembl:
ENSXMAG00000018259
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Position
9:complement(17300909..17330934)
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AA seq
482 aa
AA seq
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MDSNDPYLHLSMWHPASLPATGGSPRRERGCGHYSAGPMSAGHGHPPSMAGMVGHPSVIS
TSRPLPSPMSTLGSPMNGLASPYPVITSSLGSPSVPLQSTPNMNFGPISSPQMNSMNNVS
SSEDIKPPPGLQSLGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTV
RKDLTYTCRDNKECLIDKRQRNRCQYCRYQKCLAMGMKREGVGVCAAVQEERQRGKERGE
NEVESTSSFNDDMPVEKILDAELAVEPKTETYSDGSPGNSTNDPVTNICQAADKQLFTLV
EWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSA
GVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEALREKVYASL
ESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ
IT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatgatccatatttacacctcagcatgtggcaccctgcctctttacctgca
accggaggcagccctaggagggaaaggggttgcggtcactactcggcagggccaatgagt
gcaggccacggtcatcccccttccatggctggcatggtgggacatccctcagtcatcagc
acctccaggcccctaccgtcccccatgtccaccctgggctcgccgatgaacggcctggca
tcaccttatcccgtcatcacgtcgtcactgggatcaccctccgtacccctccagtctact
cccaacatgaactttggaccaatcagcagtccacagatgaactcaatgaacaatgttagc
agttcggaggacatcaagcctccaccgggcctgcagtctctgggaaacatcaactaccaa
tgtacgagcccgggggggatgtcaaagcacatctgtgctatctgcggggatcgctcttca
ggaaagcactatggtgtgtacagctgcgaaggctgcaaaggctttttcaagcgcacggtc
cgtaaagatctcacctacacgtgtcgagacaacaaagagtgcctgatagacaagcgccag
cggaaccgctgccagtactgccgctatcagaagtgcctggccatgggcatgaagagagaa
ggtgtgggcgtgtgtgcagccgtgcaggaagagaggcagcgcgggaaggagcgcggcgag
aacgaggtggaatccaccagcagtttcaacgacgacatgccggtggaaaagatcctggat
gctgagctggctgtggagcccaaaacggagacgtacagcgacggcagccccggaaactcg
accaacgaccccgtcactaatatctgtcaggcagcagacaagcagctcttcaccttggtg
gaatgggccaaaaggatcccacacttctctgagctccctctggacgaccaggtcatcctg
cttcgagcaggttggaatgagctgctcattgcctctttctcgcatcgctcagtcacagtt
aaagacggcatcctgttggctacaggtctacacgtgcacagaagtagcgcccacagtgca
ggagtgggatccatcttcgacagagtcctcacagagttggtatccaaaatgaaagacatg
cagatggataagacagagctgggctgcctgcgagccatcgttctattcaacccagatgca
aaaggtttgtcaaacccatcagaggtggaggcgctaagagaaaaagtctacgcttcattg
gagtcgtatacaaaacagaagtaccccgaccagcctggcaggttcgccaaactgctcctg
cgcctgccagctctgcgctccatcggtctcaagtgtttggagcatctgttcttctttaaa
ctaatcggggacacgcccattgacactttcctgatggagatgctggaggctccgcatcag
atcacatga
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integrated database retrieval system