Xiphophorus maculatus (southern platyfish): 102223796
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Entry
102223796 CDS
T02923
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X2
KO
K05719
integrin beta 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03271
Virion - Rotavirus
xma04145
Phagosome
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04514
Cell adhesion molecules
xma04530
Tight junction
xma04810
Regulation of actin cytoskeleton
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
102223796 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102223796 (itgb1)
04514 Cell adhesion molecules
102223796 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102223796 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102223796 (itgb1)
04530 Tight junction
102223796 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102223796 (itgb1)
04810 Regulation of actin cytoskeleton
102223796 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102223796 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102223796 (itgb1)
04515 Cell adhesion molecules [BR:
xma04515
]
102223796 (itgb1)
04090 CD molecules [BR:
xma04090
]
102223796 (itgb1)
Membrane trafficking [BR:
xma04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102223796 (itgb1)
Exosome [BR:
xma04147
]
Exosomal proteins
Proteins found in most exosomes
102223796 (itgb1)
Cell adhesion molecules [BR:
xma04515
]
Integrins
Integrin beta subunits
102223796 (itgb1)
CD molecules [BR:
xma04090
]
Proteins
102223796 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
102223796
NCBI-ProteinID:
XP_005798518
Ensembl:
ENSXMAG00000011009
UniProt:
A0A3B5QBR1
LinkDB
All DBs
Position
21:19954325..19986978
Genome browser
AA seq
798 aa
AA seq
DB search
MDLKLIFIAFIGLFYCCNSQKEGNECINKNAKHCGECIQTGAKCGWCTDPDFLKQGETVS
SRCDELQSLIKRGCNKTLIENPLGKRKILKNKPVTDRSKAGGNLRPEDITQVQPQKVSLT
LRSGEPQSFELKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTSLMYEMSKITSDFKI
GFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLPLTDKGSTFNRLVGEQQIS
GNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCH
LENNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLSA
NSSNVINLIIDAYNALSSEVILENTKVSNNVTIEYTSHCKNGVINKGENGRKCSNISIGD
EVHFNISITSKGCPNKTNPEIIKIKPLGFTEEVEIILHFICECDCHSEAINNSQVCSNGN
GTYECGACRCKDGRVGRECECSSNEVSTEDMDRTCRKDNGTDICSNNGECVCGTCECKPR
ENPEERYSGQFCECDNFNCDRSGNKLCGGHGRCECRKCICDPMWNGTACDCSLDESTCLA
SNKQICNGRGRCDCGICKCDDPKFQGPTCETCPTCPSVCAEHKECVECRAFGTGVKKETC
QKECSDFTMHKVPTKDKIPQPTDKSYPVMHCKERDANDCWFYYTYAVTNSTEKVVYVLDE
PDCPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPRYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaagctgatcttcattgcatttataggactcttttactgctgtaactctcag
aaagaggggaacgagtgcatcaacaaaaatgccaaacactgtggagagtgcatccagact
ggagccaaatgtggctggtgtacagacccggacttcctgaaacagggcgagaccgtgtca
agccggtgtgacgagctgcagtctctgataaaacggggctgcaacaagacattgatcgag
aacccgctggggaaacggaagattctcaagaacaagccggtgaccgatcggagcaaagcc
ggagggaacttgagaccagaggacatcactcaggtccagccccaaaaagtcagcctcacc
ctccgatctggtgagccgcagtcctttgagctgaagtttaagcgtgcagaagattacccc
atcgacctgtactacttgatggacctgtccttctccatgaaggacgatctggagaacgta
aagaacctggggaccagtctgatgtatgagatgtcgaagattacttctgacttcaagata
ggatttggctcctttgtggagaagacagtcatgccttacatcagcaccactccggccaag
ctgctgaatccatgcacaggcgaccagaactgcaccagcccgttcagctacaagaacgtg
ctgccgctgactgacaaaggctccacgttcaacagactggtgggggagcagcagatctcg
gggaacctggactcccccgagggtggcttcgacgccatcatgcaagtggccgtgtgtggg
gaacagatcggctggaggaacgtaacccgcctactggtgttttccactgacgccggattc
cactttgccggcgatggcaagctgggtggcattgtgctgcccaacgacgggaaatgccac
ttagagaacaacgtctacaccatgagccactactatgactacccctcaatcgctcacctg
gttcagaagctgagtgacaacaacattcagactatttttgccgtcacagaagagttccag
cccgtttaccaggaactgaaaaatctgataccaaagtctgcagtaggcacgctgtctgcc
aactccagcaacgtcatcaacctcatcatagatgcttacaatgctctttcttctgaagtg
attctggagaacaccaaagtttcaaacaacgtgacaatcgagtacacgtctcactgtaag
aacggagtaatcaataagggcgaaaatggaaggaagtgctccaatatctccatcggagat
gaggtccattttaacatcagcatcacctctaaaggttgtccaaacaaaaccaatcctgag
attatcaagataaagcccctgggattcacagaggaggtggagattatcctccacttcatc
tgcgagtgcgactgccacagcgaagccatcaacaacagccaggtctgcagcaacgggaac
gggacgtacgagtgcggagcctgcaggtgcaaagatggtcgcgtgggccgggagtgcgag
tgcagcagcaacgaagtgtccacggaggacatggaccggacctgccgcaaggacaacggc
accgacatctgcagcaacaacggggaatgcgtgtgcggcacctgcgagtgcaagccgagg
gagaacccggaggagaggtacagcgggcagttctgcgagtgtgacaacttcaactgcgac
cgctctggaaacaagctctgtggaggacacgggcgctgcgagtgcaggaagtgcatctgt
gaccccatgtggaacggaactgcctgcgactgttccctggacgagagcacgtgtttggcc
agcaacaagcagatctgcaacggcaggggacgctgcgattgcggcatctgcaagtgcgac
gaccccaaattccagggcccgacgtgcgaaacgtgtcccacctgtccttcagtctgcgct
gaacacaaagagtgcgtggagtgccgtgcgtttggcactggggtgaagaaagaaacgtgt
cagaaggaatgcagcgacttcaccatgcataaagtgccgaccaaagacaagatcccccag
cccaccgacaaatcctaccccgtcatgcactgcaaggagcgggacgccaacgactgctgg
ttctactacacgtacgccgtcaccaacagcacggagaaggtggtctacgtgttggatgag
ccggactgccccacgggcccggacatcatcccgatcgtcgcgggcgtggtcgccggcatc
gtcctgatcggcttggcgctgctgctcatctggaagctgctgatgatcatccacgacagg
agagagttcgccaagttcgagaaggagaagatgaacgccaagtgggatacgggtgaaaat
ccaatctacaaaagtgctgtcacaactgtggtcaatccgagatacgagggcaaatga
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integrated database retrieval system
