Xiphophorus maculatus (southern platyfish): 102225789
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Entry
102225789 CDS
T02923
Name
(RefSeq) helicase ARIP4-like isoform X3
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102225789
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102225789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
102225789
NCBI-ProteinID:
XP_014324654
Ensembl:
ENSXMAG00000019370
LinkDB
All DBs
Position
1:8745465..8809156
Genome browser
AA seq
1479 aa
AA seq
DB search
MLLLDESESFSDQSHSAPFRSENEAQGGDPAVWQCTPPPSTSPSAETPHHPPTSQSLSRP
HSRPASQSHTPPSALTGTKKRSSKPAHMRRNIRKLLREHQLDAVTKVAQQEELERRQRLE
DQRKQDFPVPLLPEYTTVSDLHVAFFMSPSSGDVTQHVTSSSASVSFQQKVKSTRQDGMC
LDSSSTSISTDKCKTDTLTSAATAQTQKTEIIDLRTDDHDTVAQVSKEEEESEPSGAHAN
DTQNQPDAQGRVLVNLNHPEADEDIFLSPQLAQAVKPHQIGGIRFLYDNLVESLELFSNS
SGFGCILAHSMGLGKTLQVISFIDVLFRHTQTHTVLAIVPVNTLQNWLSEFNTWVPPPEA
LPPDTDPALVAPRAFKVHILNDEHKNTASRAKVVEDWSRDGGVLLMGYEMYRLLSLKKSF
VAGRKKRSKKTGAPDIINLDEEDRQQQLLKGVEKALSRPGPDVVICDEGHRIKNCHASTS
QALKNIRTRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDS
TPQDVQLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPSKDEHVILVRLSPLQRALYTEFMN
RFREAGNTGWLSLNPLKAFCVCCKIWNHPDVLYEALQKENLASEQDLDLDDITSTSQGRC
PTAAPAPKSKSLDNPDPICGLSLNQLQEKANQVITYEWAKELMCDYKPGILENSAKMVLL
FHLIEESVRKGDKILVFSQSLSTLTVIEDFLAKRPVPPSPYPTDKDRPNQNWVRNLNYYR
LDGSTTASERERLINQFNDPTNTSAWVFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDA
QAVCRVYRYGQRKPCNIYRLVCDFTLEKKIYDRQISKQGMSDRVVDDLNPVLNFTRREVE
SLLHFVEEEPDPSQVRLLPGEIRESVLQRALHLYSHLITKQPFPHESLLIDRRELKLSSA
EKKAAKKGYEEEKRASVPYTRPSYAHYYPASDQSLTNIPAFSQRNWRPPTRTEEKPVASV
RPVQSASAPMMPRHVAAGSAPDRGSSSSSLGGFPVNCLQKAGVFVQKIVTTTDIVIPGTN
NSTDVQARINSGESIHVIRGTKGTYIRTSDGRIFAIRAANKAKTVDESVAAPPKDLKAPT
QEVSSGGSNGCISPDRKPKVPSKAVPRPLSPDSPEIISELQRYAAGSGSDATDGEAESGT
NALPSNKLLQKNCGSTYSGEASSHHDASVTNVTQPNKDTCIPQDLRIGSKRKAPSPLIEE
RAGKQPYAGKHSSSSPGFPFSGGYGLPPMGLNSAMLGGSVGHPLFMGSSSHYFQPPNSQL
GDPTYMYRDMFGLSGVSAAPSSSSQSSSTTVTTSASSCPSTSVSTAGSLTGALPPYMLGP
SMAGMLPPGFPLSYSPSLAGLYSGPMLPGPAATPGPAGASFLSQYPQTAASGSSSSSPSS
FSPSARSESHRVPVLVNGGEVSGGSSSDDDDDVIEMMGQ
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttctggatgaatccgagtctttttcagaccagtcccacagcgcccccttcagg
tcggagaatgaggctcagggtggcgatccggctgtgtggcagtgcacccctcccccatct
acctcgccttcggcggagacgccgcaccacccacccacctcgcagtccttgtccagaccc
cactctaggccggcaagccaaagccacacccctccctccgccctgacgggaaccaagaag
aggagctccaagccggcccacatgagacgaaacatcaggaaattgttgagggaacatcag
ttagatgcagtgaccaaagtcgcccagcaggaggagctagagcgaaggcaacgtctggaa
gatcaaaggaagcaggattttcccgtaccgctactgcctgaatacacaaccgtttctgac
ttacatgttgcattcttcatgtccccgtcctcaggcgatgttactcagcatgtgacctca
tcgtctgcatcagtgtcattccagcaaaaagtaaagtccaccagacaggatgggatgtgc
ctggactccagcagcaccagtatcagcacagataaatgcaagactgacacactcacctct
gcagcaacagcgcaaacacaaaaaacagaaataatagatttgaggacagatgaccatgac
actgttgctcaagtctccaaagaggaagaggagagtgagcctagtggtgcacatgccaac
gatacccagaaccaaccagacgcccaaggcagggtgctcgtcaacctcaaccatccagag
gcagatgaggacattttcctgtcaccacagctggcgcaagcagtcaaacctcaccagatc
ggtggaatccgtttcctgtacgacaacttggtggagtccctggagctcttcagcaacagc
agcggcttcggctgcatcctggctcacagcatgggcttaggcaaaacgcttcaggtcatc
tccttcatcgacgtcttgttcaggcacactcaaactcacactgtgctcgccatcgtaccg
gtgaatacactgcagaactggctgtcagagttcaacacatgggtccctcctcctgaagca
ttacctccagacactgatcctgcattggttgcaccgcgtgcatttaaagttcacatcctc
aacgatgaacacaaaaacacagcatctagggccaaggtggtggaggactggtctcgggat
ggtggtgtcctgctgatgggttacgaaatgtaccgtctcctgtctttgaagaagagcttt
gtggctgggcggaagaagaggagcaaaaagaccggagcacctgatatcataaacctggat
gaagaagacagacagcagcaacttctaaaaggtgttgagaaagctctttcccgacccggt
ccagatgtggtgatctgtgatgaaggacatcgcattaagaactgccacgccagcacgtct
caggccctaaagaacatacgaacccggcggcgtgtagtattgaccggctacccgctccag
aacaatctcatcgagtactggtgcatggtcgactttgtccgtcccgactttctaggaaca
agacaggagttcagtaacatgtttgagcgacccatccttaatggacagtgtgtggacagc
acgccccaggatgtccagctgatgaggtacaggagccacgtcctccacagcctgctggaa
ggctttgtgcagagacgaggccatgatgtcttgagggatcaacttccctctaaggacgag
catgtgatcctggtgcgtctgtctcccctgcagagggcactctacactgagttcatgaac
cgcttcagagaggcagggaacaccggctggctcagcctcaaccccctgaaagccttttgt
gtctgctgcaagatttggaatcatccagacgtgctgtacgaagctttgcagaaagaaaac
ctggcaagtgagcaggatttggaccttgacgacatcacatccacttcacagggcagatgt
ccgacggcagcaccggctccaaagtcaaagagtttggacaacccagatccaatctgtgga
ctgagtctgaaccagctgcaggaaaaagccaatcaggtcatcacatatgagtgggcgaaa
gaactgatgtgtgactacaagcctggcatcctggagaactcggcaaagatggtgcttctg
ttccacctgatagaggaaagtgtcaggaagggagacaaaatccttgtgttcagtcaaagt
ttgtccacacttactgtgatcgaggatttcttggccaagagaccagtgcctccttcacca
tatccaaccgacaaagaccgacccaaccagaactgggtccgcaatctcaactactacaga
ctggatggaagcacaacagcttcagagagagaaaggctgataaatcagttcaatgatccg
accaatacctcagcctgggttttcctactttcaaccagggctggttgtctgggtgtgaac
ctgattggagcgaaccgagtggtagtgtttgacgcctcctggaacccctgccatgatgcc
caggctgtgtgtcgtgtgtaccgctacggacagagaaaaccgtgtaacatctaccgcctg
gtgtgcgacttcactctggagaaaaaaatttatgatcgtcaaatctccaagcagggaatg
tctgaccgtgttgtggacgacctgaaccctgtgctgaatttcaccaggagggaagtcgag
tcccttcttcactttgtggaggaggaaccggatccatcccaggtccggctgctgcctgga
gaaatcagggagagcgttctgcagagagctttgcatctctactcccacctaatcaccaag
caacccttcccccatgagtccctcctgatagaccgcagggagctaaaactgagcagcgct
gagaagaaagccgccaagaagggctatgaggaggagaagagggcgtctgtgccgtacaca
cgcccgtcctacgctcactattaccctgccagtgatcagagcctcaccaacatccctgct
ttcagccagaggaactggcgccctcccactcgcacagaggagaaaccagtggcaagcgtc
cggccagttcagtctgcatcagctcccatgatgccccgccatgtggctgcgggttcagcc
ccagaccgcggctcctcttcatccagccttggaggcttccctgtcaactgcctgcaaaaa
gctggggtgtttgtgcaaaagatcgtcaccactactgacatagtgattccaggcaccaac
aactcaacagacgttcaggcgaggattaactccggagaaagcattcatgttatcaggggc
acaaaagggacatatatcaggacatctgatggccgaatctttgccattagagcagctaac
aaggctaagactgtggatgagagtgtcgcagctcctcccaaagacttgaaggctccaact
caggaagtttcctccggtggcagcaatggttgcatatcccctgacaggaaaccgaaggta
ccctccaaagctgtgccccgccctctttcccccgacagcccagagatcatcagcgagctg
cagcgctacgcggccggctcggggtctgacgccacagacggagaagctgagagcggcacg
aacgccctgccttctaacaagctgctgcagaaaaattgtggcagcacttactctggggaa
gcctcgagccaccatgatgcctcagttactaatgtaacccagccgaacaaggacacctgc
attccccaggatttgagaataggcagcaagcgtaaagccccaagcccattgatagaggag
cgagccggcaagcagccgtacgcaggaaaacactcctcatcttcgccagggttcccattc
tctgggggctacggccttcccccgatgggtctcaactcggccatgttgggcggttcagtg
gggcatcccctcttcatggggtcgagctcacactacttccagccacccaacagccagctg
ggcgaccccacttacatgtaccgagacatgtttggcttgagtggagtcagcgccgcccct
tcttcctcatctcagtcttcgtcgaccacagtcacgacttctgcctcgtcatgtccctct
acgtcagtcagcaccgccggttctctgacgggagccctcccgccgtacatgttgggcccc
agcatggctgggatgctcccgccaggcttccctctgtcatacagtccatctctagccggc
ctgtactctgggccgatgctgccaggtccagctgccaccccaggtccagccggagccagt
ttcctgtctcagtacccccaaactgcagcctctggctcctcctcctcctccccttcctcg
ttttccccttcagcgcgctcagaaagccaccgcgtcccggttctggtgaacggcggggag
gtcagtggcggcagcagctctgatgatgatgatgacgtcatcgagatgatgggacagtaa
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