Xiphophorus maculatus (southern platyfish): 102230440
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Entry
102230440 CDS
T02923
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102230440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102230440
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102230440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
102230440
NCBI-ProteinID:
XP_023182581
LinkDB
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Position
21:24982563..25098879
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AA seq
1296 aa
AA seq
DB search
MAGYVFPMGPESFKRFTPDSLAAIEQRMAQEEARRKKQYQEDLGDVELPRPRPDLEAGKQ
LPRIFADIPSHLVGVPLEDIDPYYFRDKRTFIVLNKGKAIFRFSATSALYMFSPFHPIRR
LAIRILVHSLFSLFIMCTILTNCCFMAMSEPANWAKYLEYTFTGIYTFESLIKILARGFC
VGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSTEHCINGSLPANTSFFCNN
KTWASIKDFIEDEDNFYKVEGAKDALICGNSSDAGKCPDGFDCLKTGRNPNYGYTSFDTF
GWAFLSLFRLMTQDYWENLYHHTLRSAGKTYMVFFVVVIFLGSFYLINLILAVVAMAYEE
QNQATIAEACQKEREFQQAMERLKKEQQMAAQKPPDSDSLTSPDLSPLGPPLDSSEERRR
SQALMGVADGEGNLSEEKLLQVDLMDGGKALHPLLARSFSTRTRRSSQVSSIFNFRLRSR
GSEGEMADDEFSVPGDVVDGVGGRTYSGGTFSGILTNPWPKRRLSTYSTASRNSQVFYPT
LNVNGKLFVSMDQNGVSPPPLQGQLPTCTMEKVKEESVPTSTTELSTMLLPRPSSTQGSE
RRGRAMSAASYLTDVMEELEESHKKCHPCWYVFAHRYLVWECSPSWLRLKQLVKIMVMDP
FLDLAITVCIVLNTLFMAMEHYPMTDEFNGMLSIGNLVFSGIFTAEMVLKIIALDPYYYF
QTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNSMG
ALGNLTLVLAIIVFIFAVVGMQLFGKNYQECVCKISKDCVLPRWHMKDFFHSFLIVFRVL
CGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVLLNLFLALLLSSFSSDNLSAPDEDGE
MNNLQIAIHRITLGLGWCRRQVADFFNGNLKRRRQKRKEAKAMMKLKRLSTVHTEANGAV
IGRHVEKYVVPEDDSYMTNPNLTISVPIAPGESDVEFPEEEEEEEEEEGQEEQSEGSEGD
EEREEEQKEEISLSEGSTVDLRKPGEEEDEYSELAEEAMDPDNCFPDVCVSRFQCCDIDT
TAGLGQMWWRTRKTCYQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRRVVKVVLEYAD
KIFTYIFILEMMLKWLAYGFKKYFTNYWCWLDFLIVDVRHPPAWRFCRSGLTRFAFRPDR
SHFDTLSAALRNSCGGAALIRQPVNPGCKEATAVPQ
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggctggctatgtgtttccaatgggaccagagagctttaagcgcttcacgccggactcc
ctggcggccatcgaacagcgcatggcccaggaggaggcccgacgcaaaaagcagtaccag
gaggacctgggcgatgtggagctgccccggccccggcccgacctggaggcggggaagcag
ctgccccggatctttgccgacatcccgtctcacctggtgggcgtccccctggaggacatc
gacccctactacttcagagacaagaggactttcatagtgctgaacaaagggaaggccatc
ttccgcttcagcgccacgtcggcgctctacatgttcagcccgttccaccccatccgccgg
ctcgccatccggatcctggtccattctttgttcagtttgttcatcatgtgcaccatcctg
accaactgctgcttcatggccatgtcggagccggccaactgggccaagtacctggagtac
accttcacaggtatttacaccttcgagtcgctcatcaagatcctggccagaggcttctgc
gtgggccccttcaccttcctgagggacccctggaactggctggacttcagcgtcatcgtg
atggcatatgtcactgagtttgtggacctgggtaatgtgtcagccttaaggacgttcagg
gtgctgcgcgcgctcaaaaccatctcagtcatcccaggcctgaagacgatcgtcggcgct
ctgatccagtcggtgaagaaactcgctgacgtcatgatcctcaccgttttctgcctgagc
gtcttcgccctcatcggcctgcagctgttcatgggaaacctgcgacagaaatgcgtccgc
agcacggagcactgcatcaacggcagcctgccggccaacacctccttcttctgcaataac
aagacctgggcctccatcaaggacttcatcgaagacgaagataatttctacaaagtggaa
ggagccaaggatgccttaatctgtggaaacagcagcgacgcagggaagtgtcccgatggg
ttcgactgcctgaagacgggcagaaacccaaactacggctacaccagcttcgacacgttc
ggctgggccttcctgtcgctgttccggctgatgacccaggattactgggagaacctctac
caccacacgctgcggtcggccgggaagacctacatggtgttcttcgtggtggtcatcttc
ctgggctccttctacctgatcaacctgatcctggccgtggtcgccatggcgtacgaggag
cagaaccaggccaccatcgccgaggcgtgtcagaaggagcgcgagttccagcaggccatg
gagagactgaagaaagagcagcagatggcggcgcagaaaccgccggactccgactccctg
acctcaccagacctctcacctcttggcccgccattggatagctctgaggagcggaggcgg
agccaggcgctgatgggtgtggccgacggggaggggaacctgtcggaggagaagctgctg
caggtggacttgatggacgggggaaaggccctccatcctctcctcgctcgctccttctcc
acgcggacgcgacgaagcagtcaggtgtcgtccatctttaacttccggctgaggagccga
gggtcggaaggcgagatggcggacgatgagttcagcgttcccggcgacgtggtggatggc
gtcggtggcaggacgtacagcggcgggacgttcagcggcatcctgaccaacccctggccc
aaacgcagactcagcacctacagcacggccagcaggaactcccaggtgttttatcccacc
ctgaacgtcaacgggaagctgttcgtctccatggaccagaacggggtctccccgccgccg
ctgcaggggcagctgcctacctgcaccatggagaaggtcaaggaggagagcgtcccgacg
tccaccacggagctcagcaccatgctgctgcctcgaccttcgtccacgcaggggtcagag
cggagggggagggctatgagtgccgccagctacctgaccgacgtcatggaggaactggag
gagtcccataagaagtgccacccctgctggtacgtgttcgcccaccgatacctggtgtgg
gagtgctccccctcctggctgcggctgaaacagctggtgaagatcatggtgatggatccc
ttcctggacctggccatcaccgtctgcatcgtcctcaacacgctcttcatggccatggag
cattacccaatgacggacgagttcaacggcatgctgagcatcggaaacctggttttctcg
gggatcttcacagcggagatggttctgaagatcatcgccttggacccgtactactacttc
cagacgggctggaacatcttcgacagcatcatcgtgtgcctcagcctcatggagctcgga
ttgtctgatgtggaggggctcagcgtcctgcgctccttccggctgctgcgtgtttttaag
ctggcccgctcctggccgaccctcaacacgctcatcaagatcatcgggaactccatgggc
gccctgggcaacctgacgctggtcctcgccatcatcgtcttcatcttcgccgtggtgggg
atgcagctgttcgggaagaactaccaggagtgtgtgtgtaagatctccaaggactgcgtc
ctcccccgctggcacatgaaggacttcttccactccttcctcatcgtgttccgggttctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtggcggggcagccgctctgc
atcctcgtcttcatgctggtcatggttatcggaaacctggtgctgctgaacctcttcctg
gctctgctcctcagcagcttcagctccgacaacctctctgccccagatgaagacggggag
atgaacaacctccagatcgccatccaccggatcactctgggcctgggctggtgccgccga
caggtggcggacttcttcaacgggaacctgaagcggcggcggcagaaacgaaaagaggcc
aaagccatgatgaagctgaaacggctgagcaccgttcacactgaggccaacggcgccgtc
atcggccgccatgtggagaagtatgtggttccggaggacgacagctacatgaccaacccc
aacctgaccatcagcgttcccatcgcccccggagaatccgacgtggagtttccggaggaa
gaggaggaggaggaagaggaggaaggtcaggaggagcagagcgaggggtccgagggagac
gaggagagagaggaggagcagaaagaagaaatcagcctatcagagggcagcacagtggac
ctgaggaagcctggcgaggaagaggacgagtactcagagctggccgaagaggccatggac
ccggacaactgcttccctgacgtgtgcgtgtcccggttccagtgctgcgacatcgacacc
acggcgggtctgggccagatgtggtggagaacgaggaagacctgctaccagatcgtagag
cacagctggttcgagtccttcatcatcttcatgatccttctcagctcgggagctctggcc
ttcgaggacatctacatcgagcagagaagggtcgtcaaggtggtgctcgaatatgctgac
aagatcttcacctacatcttcatcttagagatgatgctcaaatggctcgcctacggcttc
aagaagtacttcaccaactactggtgctggctggacttcctcatcgtcgatgtaagacat
ccgcccgcctggaggttttgtaggtccggtttgacccggttcgccttccggccggacagg
agccacttcgacactttgagcgccgccctgaggaactcctgcggcggtgcagcactgata
cgacagccggtgaaccctgggtgtaaagaggcgacagccgtgcctcagtga
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