Xiphophorus maculatus (southern platyfish): 102234904
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Entry
102234904 CDS
T02923
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102234904 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102234904 (gspt1)
03012 Translation factors [BR:
xma03012
]
102234904 (gspt1)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102234904 (gspt1)
Translation factors [BR:
xma03012
]
Eukaryotic type
Release factors
102234904 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102234904
NCBI-ProteinID:
XP_014329029
Ensembl:
ENSXMAG00000012590
UniProt:
A0A3B5PWU7
LinkDB
All DBs
Position
10:complement(1311523..1322494)
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AA seq
586 aa
AA seq
DB search
MDSRDTAPDSWEQEEDAEAPAPAAELPAAFAALNVNAKPFVPNVNAPVFVPSFLQASSAG
IPASDGSPEPAASMEVADTAAPVENGNTEADMAAEEETWEQKEEPGGGEGGGGQEELGTE
GGGEEGGAMGREDEEMMEEEEEEIPLPKVAPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
PECPWYTGLPFISHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagccccggattcatgggagcaggaggaagatgccgaggccccg
gctcccgcggcggagctcccagccgccttcgccgccctcaatgtgaacgccaagccgttc
gtccccaacgtgaacgccccggtgtttgtgccgagcttccttcaggccagcagcgccgga
atcccggcttcagacggttctccggagccagctgctagcatggaggtggcggacacagcc
gcgccagtggagaacggaaacacggaggctgacatggcggcggaggaggaaacgtgggag
cagaaggaggagcccgggggaggcgagggaggcggcggacaggaggagttgggaacggag
ggaggcggcgaagaaggcggcgccatggggagagaggatgaggagatgatggaggaggaa
gaggaggaaatccccctccctaaggtggccccgccgctgcctgatgctcccaagaaggaa
cacgtaaacgtcgtcttcatcggtcacgtcgatgctggtaaatccaccatcggagggcag
atcatgtacctcactgggatggtggacaagcgaacactggagaaatatgaacgagaggcg
aaggagaagaacagggagacatggtatctgtcgtgggctctggacaccaaccaggaggag
agagacaagggcaagacggtggaggtggggagggcttactttgagacggagaagaaacat
ttcaccatcctggacgcgccgggacacaagagcttcgtccccaacatgatcggcggcgcg
tcgcaggccgacctggcggttctggtcatttcggccagaaaaggcgagtttgagacgggc
tttgagaagggcggccagacgcgggagcacgccatgctagctaaaacagccggagttaaa
catctgatcgttctggtcaacaagatggatgaccccaccgtgaactggagcctagagagg
tatgaggagtgtaaagagaagctggtgccatttttaaagaaggtgggcttcaacccaaag
aaggacatccacttcatgccttgttctggactcacaggtgccaacctcaaagacccagtg
cccgagtgtccctggtacacgggtctgcccttcatctcccacctggacagtttgccaaac
ttcaacagatccagcgacggccccgtcagactaccgatagtggacaagtacaaggacatg
gggacggtgatcctggggaagctggagtccggctccatcagtaaagctcagcagctggtc
atgatgcccaacaggcacacggtggaggttctgagcctgctgagcgacgacgtggagacg
gacgacgccgggccgggggagaacctgaagctgcggctcaaaggaatagaagaagaggag
attctgcccggcttcatcctctgcagccccgacaacctgtgccactcgggccgcaccttc
gacgctcagattgtcatcattgagcacaagtccatcatttgtcccggttacaacgcggtg
ctgcacatccacacctgcatcgaagaggtgcagatcacggcgctgatctgcctggtggat
aagaagacgggcgagaagagcaagacgcggccgcgcttcgtgaagcaggaccaggtgtgc
atcgcccggctgcgggccgccggcgtcatctgcttagaaaccttcaaggatttcccccag
atgggacgcttcactctgagagacgaagggaaaacgatcgccattggcaaagtgctgaag
ctggttccagagaaggactaa
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