Xiphophorus maculatus (southern platyfish): 102235769
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Entry
102235769 CDS
T02923
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
xma04140
Autophagy - animal
xma04217
Necroptosis
xma04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102235769 (sqstm1)
04137 Mitophagy - animal
102235769 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
102235769 (sqstm1)
04218 Cellular senescence
102235769 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102235769 (sqstm1)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102235769 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102235769 (sqstm1)
Membrane trafficking [BR:
xma04131
]
Autophagy
Mitophagy
Cargo receptors
102235769 (sqstm1)
Pexophagy
102235769 (sqstm1)
Aggrephagy
102235769 (sqstm1)
Xenophagy
102235769 (sqstm1)
Other autophagy associated proteins
Midbophagy
102235769 (sqstm1)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102235769 (sqstm1)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102235769 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
102235769
NCBI-ProteinID:
XP_005812336
Ensembl:
ENSXMAG00000015167
LinkDB
All DBs
Position
23:564025..567736
Genome browser
AA seq
414 aa
AA seq
DB search
MSVTVKAYLLGKDEQVKEIRRFAVDQEVSCSFEYLSRKVAAVFSNLSGSTCSLFYKDEDG
DLVAFSSDDELMMGLSFVKDATFRLYIRERKEHRRDFPLHAFPPFAFGPPPPHHHGPAHT
APPTHMAPPPAVHPNVTCDGCEGAVVGTRFKCSVCPDYDLCSSCQAQGKHTEHALLPIWH
PLQHWFPRGKWMKRMRHCGMWNQNQEQNQNQNQNQEQAGAAKPAADSSAPSASQASVDFL
KNIGEGVAAMLSPLGIDVDIDVEHEGQKTKVAPPTQSGAGPGDVEMNEDGGASNEDGVNQ
GSKVSRDSDEEWTHLSSKEVDPSTGELQSLQPEGRAPLEPGAPQQGPTGLREAALYPHLP
QEADPRLVESLAAMLSMGFGDEGGWLTHLLQAKNGDIGAALDAIQYAKQPRPHQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacagtaaaggcctacctgctggggaaggacgagcaggtgaaggagatccgc
cggttcgcggtggaccaggaggtttcctgcagcttcgagtacctgagccggaaggtggcg
gccgtcttctccaacctgagcggctccacctgcagcctcttctataaagatgaagatgga
gacctggtggcgttctcctccgacgatgagctgatgatggggctgagcttcgtgaaggac
gccacgttccgcctctacatcagagagaggaaggagcaccgtcgggacttccctcttcac
gccttcccccccttcgccttcggcccccctcctcctcatcatcatggccccgcccacacg
gccccgcccacacacatggccccgccccccgccgtccaccctaacgtgacgtgcgacggc
tgcgaaggcgcggtggtgggaacgcgcttcaaatgctcggtgtgtccggactacgacctt
tgctcctcctgccaggctcaggggaagcacactgagcacgctctactgcccatctggcac
cccctgcagcactggtttcctcgggggaagtggatgaagaggatgagacactgtggaatg
tggaaccagaaccaggagcagaaccagaaccagaaccagaaccaggagcaggccggggct
gctaaacctgcagcggacagcagcgccccctctgcctcccaggccagcgtggacttcctg
aagaacatcggtgagggcgtggccgccatgctgagcccgctgggcatcgacgtggacatt
gacgtggagcacgaaggtcagaagaccaaggtggccccgcccactcagagcggcgcaggg
ccaggtgacgtagagatgaacgaagatggcggagccagcaacgaggacggagtcaatcaa
gggtcaaaggtgagccgggactctgacgaggagtggactcacctgagctccaaggaggtg
gacccgtccacaggtgagctgcagtcgctgcagccagagggccgggcgccgctggagccc
ggggccccgcagcaggggcccaccggcctgcgggaggccgcgctctacccacacctgcct
caagaagccgacccgcgtctggtggagtcgctggcggccatgttgtccatgggcttcggc
gacgaaggcggctggctgactcacctgctgcaggccaagaacggcgacatcggcgctgcg
ctcgatgccatccagtacgccaagcagccccgcccacaccagtga
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