Xenorhabdus nematophila ATCC 19061: XNC1_0353
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Entry
XNC1_0353 CDS
T01274
Symbol
yrdC
Name
(GenBank) putative RNA-binding protein with unique protein fold, with YrdC/RibB domain
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xne03009
]
XNC1_0353 (yrdC)
03016 Transfer RNA biogenesis [BR:
xne03016
]
XNC1_0353 (yrdC)
Enzymes [BR:
xne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
XNC1_0353 (yrdC)
Ribosome biogenesis [BR:
xne03009
]
Prokaryotic type
Other maturation factors
XNC1_0353 (yrdC)
Transfer RNA biogenesis [BR:
xne03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
XNC1_0353 (yrdC)
Prokaryotic type
XNC1_0353 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CBJ88435
UniProt:
D3VHU6
LinkDB
All DBs
Position
287628..288197
Genome browser
AA seq
189 aa
AA seq
DB search
MSNEISPAFDSIVTALKEGKVIAYPTEAVFGLGCDPDSENAVQELLALKNRPWEKGLILI
ADNYERLCSYIDDVQLSDEQKETIFSFWPGPVTWVIPAKKITPKWLTGKFSTLAVRVTDH
PLVKQLCSLYGKPLVSTSANLSGLEPCRSVEEVRLQFGNRIPVLSGEVGGRKNPSEIRDA
LTGKLYRQG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaaatctcacctgcatttgattcaattgtcacggctttgaaagaaggaaaa
gtgattgcttatccgacggaagctgtttttggtttaggatgtgatcccgatagtgaaaac
gctgtacaagaattattagcgttgaaaaacaggccgtgggaaaaaggactaatccttatc
gctgacaattatgagaggctatgctcttatattgatgatgtgcaattgagtgatgaacag
aaagaaaccatattttcattttggccggggcctgttacatgggtcattccagcaaaaaaa
ataacaccaaaatggctgacgggtaagttttcaactttggcagtcagagtcacagatcat
cctttagttaaacagctatgctccctgtacggaaaaccacttgtttcaacgagtgcgaat
ttaagtgggttagaaccatgccgcagtgtggaagaagttcgcctgcaatttggaaatcgt
atcccggttttgtcaggagaagtaggaggacgcaaaaacccatcagaaatcagagatgct
ttaactggcaaactatatcggcaaggatag
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