Xenorhabdus nematophila ATCC 19061: XNC1_2428
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Entry
XNC1_2428 CDS
T01274
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B)
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xne03009
]
XNC1_2428
Enzymes [BR:
xne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
XNC1_2428
Ribosome biogenesis [BR:
xne03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XNC1_2428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CBJ90487
UniProt:
D3VGQ1
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All DBs
Position
complement(2351860..2352783)
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AA seq
307 aa
AA seq
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MSDKTEKLQKILARSGHGSRREIEGYIQQGRISIDGKTATLGDRIEVKPSIKIRLDGRIL
NIKEPQKTVCRVLAYYKPEGELCTRHDPEGRPTVFDRLPRMQGARWIAVGRLDINTCGLL
LFTTDGELANRLMHPSQEVEREYAVRVFGEVDTAKLRQLTQGVQLEDGPASFKTITFKGG
EGINQWYNVTLTEGRNREVRRLWESVGVQVSRLIRVRYGDINLPKGLPRGGWTELGLEQT
NYLRQLVGLGDEMVTKVAVERDQRRIKANQIRRAVKRHAKVASRPAGKRPASSSRQNAGR
KTTPKGR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaacagaaaagttacaaaaaattcttgcgcgttctggtcatggttcccgc
cgcgaaattgaaggatatattcaacaaggacgcattagcatcgatggtaaaaccgcaaca
ctgggtgatcgcatcgaagttaagccttcaataaaaatccgtctggatgggcggatctta
aatatcaaagaaccgcaaaaaacagtttgccgcgttctggcttattacaaaccggaaggt
gaattgtgtactcggcatgatccagaaggtcgtccgaccgtgtttgatcgtctgccaaga
atgcagggagctcgttggattgccgtagggcgcttggatatcaatacctgcgggttgttg
ctgtttacaacagatggcgagctggcaaaccgcctgatgcacccaagccaggaagttgag
cgtgaatacgctgtgcgtgtttttggtgaagtggacactgccaaactccgccaactgact
caaggtgttcaactggaagatggtcccgcttctttcaaaacgatcacctttaaaggtggg
gaaggtatcaaccagtggtacaacgtcactctgactgaaggccgtaaccgcgaagtcaga
cggttgtgggaatcggttggtgtgcaggtcagccgtcttatccgtgtacgttatggtgat
atcaatctgccaaaaggtctgccgcgtggcggttggactgaattggggctggaacagact
aactatttgcgtcaattggttggtctgggcgacgaaatggtgaccaaagtggccgttgaa
cgtgatcagcgtcgtatcaaagcgaaccagattcgtcgtgcagtgaaacgacatgcgaag
gtggcatctcgtccggcaggcaaacgtcctgcaagtagttctcgccaaaatgcagggaga
aaaacgacacctaaaggtcgttaa
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