Xenorhabdus nematophila ATCC 19061: XNC1_3292
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Entry
XNC1_3292 CDS
T01274
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00260
Glycine, serine and threonine metabolism
xne00460
Cyanoamino acid metabolism
xne00630
Glyoxylate and dicarboxylate metabolism
xne00670
One carbon pool by folate
xne00680
Methane metabolism
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
xne01120
Microbial metabolism in diverse environments
xne01200
Carbon metabolism
xne01230
Biosynthesis of amino acids
xne01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XNC1_3292 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XNC1_3292 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XNC1_3292 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XNC1_3292 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XNC1_3292 (glyA)
Enzymes [BR:
xne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XNC1_3292 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CBJ91344
UniProt:
D3VLL8
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Position
3219396..3220649
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AA seq
417 aa
AA seq
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MLKREMNIANYDPELWQAMEQEVCRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKELFGADYANVQPHSGSQANAAVYMTLLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDDSGKIDYDDIRTQAQKHQPKMIIGGFSAYSGV
VDWAKMREIADEIGAFLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDDEFYKKLNSSVFPGSQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKVMVE
MFLQRGYKVVSGETENHLFLLDLVDKDITGKEADAALGRANITVNKNSVPNDPRSPFVTS
GIRIGTPAITRRGFKEEETRELAGWISDVLDNINDDATIENVKQKVLAICAKYPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaatattgcgaattacgatcccgaactatggcaagcgatggaa
caggaggtctgtcgtcaagaagaacacattgaattgattgcctctgaaaactacaccagc
ccacgcgttatgcaggctcaaggatctcagctcactaataagtatgctgaaggttatccg
ggtaaacgctattatggcggttgtgagcatgtcgatgtcgttgaacaacttgcgatcgat
cgtgcaaaagagttatttggtgcagattatgccaacgtccagccacattctggttctcag
gcgaacgctgcggtatatatgacattgctgcaacccggagataccgttttaggcatgaat
ctggctcatggtggccatttgacgcacggttctcccgttaacttctcaggtaaactttat
aacatcgtgccttatggcattgatgacagcggtaaaatagattacgacgatatccgcact
caggcgcaaaaacatcagccaaaaatgattatcggtggattctctgcctattctggtgtt
gttgactgggcgaagatgcgtgaaattgctgatgaaatcggcgctttcctctttgttgat
atggcccatgttgccggtctgatcgccgcgggcgtctatcctaatcccgttcctcatgct
cacgttgtaacaaccacaacgcataaaacattggcaggcccacgtggtggactgattttg
gcgaaaggtggcgatgacgagttttacaaaaagctgaattcttctgttttccctggttct
cagggcggtccattgatgcacgttattgccggtaaggctgttgcattgaaagaagccatg
gaacctgaatttaaagtttaccagcaacaagtcgccaaaaatgccaaagtgatggtagaa
atgttcctgcaacgtggttataaagtggtttctggagagactgaaaaccatttgttcctg
ctggatttagtggacaaagacatcaccggtaaggaagcggatgctgcattaggacgcgct
aatattacggttaacaaaaacagtgttcctaacgatcctcgtagcccatttgtgacttct
ggtattcgtatcggtacgcctgctattacccgccgtggctttaaagaagaagaaaccaga
gaattggccggttggatcagtgatgtgttagataacatcaatgatgatgcgacgattgaa
aatgttaagcagaaagtattggcaatctgcgcaaaatacccggtttatgcataa
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