Xanthomonas oryzae pv. oryzae KACC 10331: XOO1963
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Entry
XOO1963 CDS
T00235
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOO1963 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoo03032
]
XOO1963 (rnhB)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
XOO1963 (rnhB)
DNA replication proteins [BR:
xoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
XOO1963 (rnhB)
Elongation factors (archaeal)
XOO1963 (rnhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AAW75217
UniProt:
Q5H1F4
LinkDB
All DBs
Position
complement(2063703..2064461)
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AA seq
252 aa
AA seq
DB search
MVRSKHMKILAANAQADSSNTEARQSLLFSQSPIPNAESRLLVAGVDEAGRGPLAGPVAV
AAVVFDPNKPRINGLDDSKQLTAERREQLYARIVDRALSWSVVLIDSEEIDRINIYQATM
LGMRRAVEGVAHVAGFARIDGNRVPKGLPCPAEALIGGDALDRAIMAASIVAKVTRDRLM
HELHAQHPEYRFDQHKGYSTPMHLAALQTHGPCPQHRRSFAPVRLALEGREQGSAAIGDP
EQLQVAQLVAPL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttggtcaggagcaaacatatgaagattctcgctgcgaacgcccaggccgatagctccaac
accgaggcgcgccagtcgctcttgttcagccaatccccaatcccgaatgccgaatcccgg
ctcttggtcgccggcgtcgatgaagcgggccgcgggccgctcgctggccccgtcgccgtc
gccgccgtggtgttcgacccgaacaagccgcgcatcaatgggctggacgattccaagcag
cttaccgccgagcggcgcgagcagttgtatgcgcgcatcgtcgatcgggcgctgtcgtgg
tcggtggtgttgatcgacagcgaggagatcgaccgcatcaatatctaccaggccaccatg
ctcggcatgcggcgcgcggtggaaggcgtggcgcatgtggccggattcgcgcgcatcgat
ggcaaccgcgtgcccaaggggctgccctgcccggccgaggcgctgatcggcggcgacgcg
ctggaccgcgccatcatggccgcctcgatcgtggccaaggtcacccgcgaccggctgatg
cacgaactgcacgcgcaacatccagagtatcgcttcgaccagcacaagggctacagcacg
ccgatgcacctggctgcattgcagacccacgggccatgcccgcagcatcgacgcagtttt
gcgccggtccgcttggcgctggaaggccgtgagcagggatcggccgcgatcggcgaccca
gagcagttgcaggtcgcgcagctggttgcgccgctgtaa
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integrated database retrieval system