Xanthomonas oryzae pv. oryzae KACC 10331: XOO2209
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Entry
XOO2209 CDS
T00235
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xoo03019
]
XOO2209 (orn)
03009 Ribosome biogenesis [BR:
xoo03009
]
XOO2209 (orn)
Messenger RNA biogenesis [BR:
xoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XOO2209 (orn)
Ribosome biogenesis [BR:
xoo03009
]
Eukaryotic type
Pre-60S particles
RNases
XOO2209 (orn)
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAW75463
UniProt:
Q5H0Q8
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All DBs
Position
2320590..2321174
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AA seq
194 aa
AA seq
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MAENLAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPTVANGFAKSSAHTALSDVRDSINELRHYRQF
MGALGGDTAMDVEG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaccttgcaggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattcgattatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgaggggccggaactggccatcgcgcatccgctggaaaccctggaagcg
atggacgagtggaaccgcaatcagcaccgccgttcgggtctttggcagcgcgtgctcgac
agccaggtcacccatgcgcaggccgaagcgcagaccgtggcattcctgggcgagtggatc
cgcgctggcgcctcgccgatgtgcggcaactcgatctgccaggatcgccgcttcctgcat
cggcagatgtcgcgccttgagcgctatttccattaccgcaatttggatgtgtccaccatc
aaggaacttgcgcggcgttgggcgccgacggtggccaatgggtttgccaagagttctgcg
cataccgccctcagcgatgtgcgcgattcgatcaatgagctgcgtcactaccgtcagttc
atgggtgcacttggtggcgataccgctatggatgtggaaggctga
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