Xanthomonas oryzae pv. oryzicola BLS256: XOC_3844
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Entry
XOC_3844 CDS
T01873
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00521
Streptomycin biosynthesis
xor00523
Polyketide sugar unit biosynthesis
xor00541
O-Antigen nucleotide sugar biosynthesis
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01250
Biosynthesis of nucleotide sugars
Module
xor_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XOC_3844 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XOC_3844 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XOC_3844 (rfbC)
Enzymes [BR:
xor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XOC_3844 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEQ97934
UniProt:
G7TGZ3
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Position
complement(3979100..3979657)
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AA seq
185 aa
AA seq
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MKIVETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENNKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISDPLLSAKDAAAPFLADVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgtcgaaacgcgtttaccaggttgtgtcgtcatcgagccggcagtgttcggc
gatgagcgcggatatttcttcgaaacgtggaatgccgagcgcttcgggcaacatggtctg
ccgacgcagttcgtgcagagcaatgtctccacctcggccaaaggcgtgttgcgtggtttg
cattaccagtggccgcgtcctcagggcaagctggtcagcgtgctggagggtgaggtctac
gacgtggcggtcgatgtccgccatggctcgcccaacttcgggcagtgggcggcagtggtg
ttgagcgcagaaaacaacaagcagttctggataccggaagggtttgcgcacggctttgcg
gtgctgtcggagcgagccgtgttcagttacctgtgcaccgacgtgtatgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcgatcggtatcgattggccgatcagcgatcca
ttgctctctgcaaaggacgccgctgcgccgtttctggccgatgtgcccgctgagcgcttg
ccggtgtatacaccgtga
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