Xanthomonas oryzae pv. oryzae PXO86: AZ54_07875
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Entry
AZ54_07875 CDS
T03765
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZ54_07875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_07875
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZ54_07875
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZ54_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
AJQ82551
LinkDB
All DBs
Position
1594855..1596876
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AA seq
673 aa
AA seq
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MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDESDRRREKQVEYNLEHGITPESVERPISDIMEGA
REDAAEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKTASLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatccccatactcgccagcgggcgaccagcctgccgcc
atcgacaagttggtggccaactttgaggctgggctggccaaacagacgctgttgggggtg
accggttcgggcaagacctacaccattgctaacgtcgtccagcaggtgcagaagccgacc
ctggtaatggcgccgaacaagacgctggcggcgcagttgtatggcgagttcaagtcgttc
ttcccgcacaacgcggtggagtacttcgtcagctactacgactattaccagccagaggct
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgtttgtcggcgaccaagaccttgctgtcgcggcgcgattcgctggtggtggcg
acggtgtcggcaatctatggcctcggcgcgccggaagactatttgtcgctgcgcctgatc
ctgtcgattggcgaacacatcgatcagcgtcagttgatccgtcatctcaccgacctgcag
tacacccgtaacgagttcgagctcacgcgcggcgcttttcgcgtgcgcggcgaggtgctg
gatgtgttccctgccgagtcggataccgaggccctgcgcatcgagttgttcgatggcgac
atcgagcagctgacgctgttcgatccgctcaccggcgagaccttgcgcaagctgcagcgc
tataccgtgtacccgaaaacgcattacgccacgacgcgtgagcgcacgttgagtgcggta
gacaccatcaaagaagagttgaaagagcggcttgagcagctctactcgcagaacaagttg
gtcgaggcgcagcgtctggcgcagcgcacgcagttcgatctggaaatgatggccgaagtg
ggtttctgcaacggtatcgaaaactactcgcggcatctcaccggcaaggcacccggcgag
ccgccgccgaccttgttcgattacctgccgccggacgcgctactggtcatcgacgaatcg
cacgtgaccattccgcagatcggcgcgatgtacaaaggcgaccgctcgcgcaaggaaacg
ctggtggagttcggcttccgcttgccgtctgcgctggataaccggccgctgcggttcgaa
gagtgggaagcgcgttcgccgcgcagcatttacgtgtcagcgacaccgggtccttacgag
ttgcgcgagtcggctggcgaggttacggagttggtggtgcgcccgactggcttgatcgac
ccggtagtggagatccgtccggtgggcacgcaggtcgatgacctcatgtcggagattcac
gaacgcatcaagctcggcgaccgcgtgctggtgaccacattgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgagcatggcattcgggtgcgctatctgcactcggatatc
gacaccgtagagcgtgtggaaatcattcgcgacctgcgtctgggcaaattcgatgtgctc
gtcggcatcaatctgctgcgcgagggcttggacatgccggaagtgtcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggg
cgcgccgcacgcaatttgcgcggcaaggccattttgtatgccgacaagatgacccgttcg
atgcaggcagcgatcgacgagagcgatcgccgccgtgaaaagcaggtcgagtacaacctg
gaacatggcatcacgcctgaatctgtcgagaggccgatctccgacatcatggaaggtgcg
cgcgaagatgcagccgagaagaagtcgggcaaggggcgttcgaagtcgcgtcaggtcgct
gaggagacacccgattaccgcgccatgaaacccgcggaaatcgccggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatcttgagttcgaggccgcagcgcaaata
cgcgaccagatccagaagctcaaaacggcaagcctggcctag
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