Xanthomonas perforans: BJD13_04220
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Entry
BJD13_04220 CDS
T04778
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpe03016
]
BJD13_04220
Enzymes [BR:
xpe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BJD13_04220
Transfer RNA biogenesis [BR:
xpe03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BJD13_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
APO98370
UniProt:
A0A0G9F252
LinkDB
All DBs
Position
complement(601966..603420)
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AA seq
484 aa
AA seq
DB search
MPGTPVSDLSAAAAVDAPALLPLPVARPSAPAVVRGKLYIKTHGCQMNEYDSAKMADVLA
ASEGLELTDNPEEADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGKPVIIGVGGCVASQ
EGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGP
SAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYR
GAYGADAGDAAQYADLGLLIRTIAQIDGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYL
HLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTM
KLIEDVGFDQSFSFVYSRRPGTPASDLQDDTPEAVKQARLARLQAHINAHAASISQSMVG
SVQRVLVEGPSRRDPNELTGKSENMRPVNFPGNPRLIGQFVDVLITEAMSNSLRGRIQLD
DSAH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacacccgtttccgacctgtccgcggcagctgccgtggacgcacccgccctg
ttgcccttgcccgtcgcgcgcccatcggcgcctgccgtggtacgcggcaagctctatatc
aagacccacggatgccagatgaacgagtacgactcggccaagatggccgacgtgcttgcc
gcttccgaaggcctggagctgaccgacaaccccgaggaagcggatgtggtgctggtcaat
acctgttccattcgcgaaaaagcccaggaaaaagtcttcagccagctgggtcgctggaag
gcgctcaaggccggcggcaagccggtgatcatcggcgtcggcggctgcgtggcgtcgcag
gaaggcgaagccatcgtcaagcgtgcgccctacgtggacctggtgttcggcccgcagacc
ctgcaccggctgccggaactgattcgcgcgcgacgcgaatcgggcaagtcgcaggtggac
atcagcttcccggaaatcgagaagttcgaccgtctgcccgagccgcgtgccgaaggtccg
tcggccttcgtctcgatcatggaaggctgctccaaatactgctcgttctgcgtggtgccc
tacacccgtggcgaagaagtcagccggccgttcgaggacgtgctggtggaagtggcgcaa
ttggcggcgcaaggcgtgcgcgagatcaacctgcttggccagaacgtcaacgcgtaccgc
ggtgcgtatggcgccgatgccggcgacgccgcgcagtacgccgatctgggcctgctgatc
cgcaccatcgcgcagatcgacggcatcggccgcatccgcttcaccacgtcgcatccgctg
gagttttccgattcgctggtggatgcctaccgcgacgtaccgcagctggccaactacctg
cacctgccggtgcaggccggcagcgaccgcattctgtcggcgatgaagcgcggctacacc
gcgctggaattcaagtcgaagatccgcaagctgcgcgcagtgcgcccggacatctcgatc
agttcggacttcatcgtcggcttccctggcgagactgaagcggacttcgaaaagaccatg
aagctgatcgaggacgtgggcttcgaccagagcttttcgttcgtgtattcgcgccgcccc
ggcaccccggcatcggacctgcaggacgacacgccggaggcggtgaagcaggcgcgtctt
gcgcgtctgcaggcgcatatcaacgcgcacgcggcgagcatttcgcaatcgatggtgggc
agcgtgcaacgcgtgctggtggaaggcccctcgcggcgcgacccgaacgaactgaccggc
aagagcgagaacatgcgcccggtgaatttcccaggcaacccgcgtttgatcggacagttc
gtcgatgtgttgatcaccgaggcgatgagcaattcgctgcgtggccggattcaactggac
gacagcgcacattga
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