Xanthomonas perforans: BJD13_05130
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Entry
BJD13_05130 CDS
T04778
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpe03019
]
BJD13_05130
03009 Ribosome biogenesis [BR:
xpe03009
]
BJD13_05130
Messenger RNA biogenesis [BR:
xpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJD13_05130
Ribosome biogenesis [BR:
xpe03009
]
Eukaryotic type
Pre-60S particles
RNases
BJD13_05130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2252
Motif
Other DBs
NCBI-ProteinID:
APO98531
UniProt:
A0A0G9DX12
LinkDB
All DBs
Position
796777..797361
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AA seq
194 aa
AA seq
DB search
MAENLAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPSVANGFAKSSAHTALSDVRDSIDELRHYRQF
MGALGGDAAAGVEG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaccttgcaggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattccatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgaggggccggaactggccattgcgcatccgctggaaaccctggaagcg
atggacgaatggaaccgcaatcagcaccgccgttcgggtctgtggcagcgcgtgctcgac
agccaggtgacccacgcgcaggctgaagcgcagacggtggcattcctgagcgagtggatc
cgtgccggcgcctcgccgatgtgcggcaactcgatctgccaggatcgccgcttcctgcac
cgtcagatgtcgcgcctggaacgctatttccattaccgcaatctggacgtgtccaccatc
aaggaactcgcgcgacgttgggcgccctcggtggcgaacgggtttgccaagagttcggcg
cataccgccctgagcgatgtgcgcgattcgatcgacgagttgcgccactaccgtcagttc
atgggtgcgctcggtggcgatgctgcggcgggtgtggagggctga
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