Xenorhabdus poinarii: XPG1_3458
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Entry
XPG1_3458 CDS
T03805
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03420
Nucleotide excision repair
xpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XPG1_3458 (uvrD)
03430 Mismatch repair
XPG1_3458 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_3458 (uvrD)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XPG1_3458 (uvrD)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPG1_3458 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XPG1_3458 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDG23094
UniProt:
A0A068R7V5
LinkDB
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Position
complement(3410877..3413051)
Genome browser
AA seq
724 aa
AA seq
DB search
MVIMDVSYLLESLNDKQREAVAASRSNMLVLAGAGSGKTRVLVHRIAWLLSVENAAPFSI
MAVTFTNKAAAEMRHRIENLIGTSQGGMWIGTFHSLAHRLLRAHHLDANLPQDFQILDSE
DQHRLIKRIIKAMNLDDKQWPARQGMWYINGKKDEGLRPQHIENYGNPVEATWLKIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPPILQHYRTRFTNILVDEFQDTNSIQYAWIRLLA
GESGKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPATATIRLEQNYRSTSNILKAANALI
AHNHDRLGKNLWTEGREGEPIALYSAFNELDESRYVVSRIKHWLDNGGALKECAILYRSN
AQSRVLEEALLQAAMPYRIYGGQRFFERQEIKDALSYLRLVANRHDDAAFERVVNTPTRG
IGDRTLDVVRQVSRDQQKTLWESCLLLIQEKVLAGRAASALQRFIELIEALETETQEMPL
HVQTDRIIRDSGLWAMYQQEKGEKAQARIENLEELVTATRQFSYQDEDENLLPLQAFLSH
AALESGESQADASQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSIDEGGRLEEERR
LAYVGVTRAMEKLTLTYAESRRLYGKEVHHRPSRFIGELPVECVAEVRLRATVSRPVSHK
RLGTPISASDSGYALGQRVRHPKFGEGTIINIEGSGEHCRLQIAFQGEGIKWLVAAYARL
ETSQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtaattatggacgtttcttatctgctcgaaagtctcaatgacaaacaacgcgaagcg
gtcgcagcatctcgcagtaacatgctggttctggccggtgctggcagtggtaaaacgcgt
gtattggttcaccggatcgcatggttactctcagttgaaaatgcggcgccattttctatc
atggcggttacgtttaccaataaagcggcggctgagatgcggcatcgcattgaaaacctg
attggcaccagtcagggaggcatgtggattggcacattccatagtcttgctcaccgcttg
ttacgcgctcatcatctggatgctaatttgccgcaggattttcagatcctcgatagcgaa
gatcagcatcgtctcatcaaacgcatcatcaaagcgatgaatctggatgacaaacagtgg
ccggcccgtcagggaatgtggtacatcaatggcaaaaaagatgaaggcttacgcccacag
cacattgaaaattatggcaatccggtcgaggcgacctggctgaaaatctaccaggcctat
caggaagcgtgtgatcgcgctggattggtggattttgcggaattactgctgcgagcgcat
gaactctggttgaacaagccgccgatcctgcaacattatcgtacacgtttcaccaatatt
ctggtggacgaatttcaggatacgaacagtattcaatacgcctggatccgtcttctggct
ggtgagagtggcaaggtcatgattgtcggggatgatgatcagtccatctatggttggcgt
ggggctcaggtcgaaaatattcagcgcttcctcaccgattttccggcaacggcaacaatc
cgtctggaacagaattatcgttcgaccagcaatatcctcaaggcggctaatgccctgatt
gcccataatcatgatcgtttgggtaaaaatttatggacagaagggcgtgaaggggaaccg
attgccctttatagcgccttcaatgagctggatgaatcccgttatgttgtcagccgtatt
aagcattggttggataacggcggggcactgaaagagtgtgcgatcctgtatcgaagcaat
gcgcaatcccgtgtcttggaagaagcactgttgcaggctgccatgccttaccgcatttac
ggtggtcagcgcttcttcgagcgtcaggaaatcaaagatgctttgtcttacttgcgcttg
gtcgcaaaccgtcacgatgatgcggcttttgaacgcgtggtcaatacgccaacccgtggc
attggtgacagaacactcgatgttgtgcgtcaggtgtcgcgtgatcagcaaaaaaccttg
tgggaaagttgcttattattgatacaggaaaaagtgctggcgggtcgggcggcctctgct
ttgcagcgttttattgagttaattgaagcgctggaaacagagactcaggaaatgccattg
catgtacagaccgatcgtattatccgtgattctggcttatgggcgatgtatcaacaggaa
aaaggcgaaaaggcgcaggcgcgtattgaaaaccttgaagaactcgtcaccgcaacccgc
caattcagctatcaggacgaagatgaaaatctgctgccattgcaggccttcctgtcccat
gccgcacttgaatcgggtgaaagtcaggcagatgccagtcaggatgcggtgcaactgatg
actttgcattcagcgaaaggtttggaattcccacaagtctttattgtcggtatggaagaa
ggcatgtttccgagccagatgtccattgacgagggcggccggttggaagaagagcgccgt
ctggcctatgtcggtgtgaccagagcgatggaaaaactgacactgacttatgcggaaagt
cgtcggttatatggtaaggaagtgcatcaccgtccctcgcgttttatcggtgaacttccg
gtggaatgcgtggcagaagttcgcctgcgggcaaccgtctcccgcccggttagtcacaaa
cggcttggtacgccaatcagcgccagtgacagtggttacgcgcttgggcagcgtgtacgt
catcctaaatttggtgaagggacgattatcaatatagaaggcagcggggaacattgccgg
ttgcaaattgcgtttcagggtgaagggattaaatggctggtagccgcttatgccaggctg
gaaacgagccaataa
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