Xenorhabdus poinarii: XPG1_3628
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Entry
XPG1_3628 CDS
T03805
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo00540
Lipopolysaccharide biosynthesis
xpo01100
Metabolic pathways
xpo01250
Biosynthesis of nucleotide sugars
Module
xpo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XPG1_3628 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xpo01005
]
XPG1_3628 (hldD)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
XPG1_3628 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
xpo01005
]
Core region
XPG1_3628 (hldD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CDG23255
UniProt:
A0A068RAQ2
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All DBs
Position
3573617..3574555
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AA seq
312 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDEGYKDILVVDNLKDGTKFVNLVDLDITDYMDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHYCLDRQIPFLYASSAATY
GGRSDNFIEARQYEKPLNVYGYSKFLFDQYVRDILPHADSQICGFRYFNVYGPREGHKGS
MASVAYHLNHQIHQGQNPKLFAGSEHFRRDFIYVGDVTAVNLWFWKNSISGIFNCGTGRA
ESFQAVADAVTQFHQEKSPVVEYIDFPEKLKGHYQRFTQADLTKLRATGYETPFKTVAEG
VAEYMQWLNQDN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcactggtggcgcagggtttattggcagcaatattgtcaaggcactgaat
gacgaaggctataaggatattctggttgttgataacctgaaagacggtacaaaattcgtc
aatttggttgatttggatatcaccgattatatggataaagaagatttcattgccagtatc
gttgcgggtgatgatttaggcgatattgacgccattttccatgagggtgcgtgctcatcc
accaccgaatgggatggtaagtatatgatggataacaattatcagtactccaaagatata
ctgcactattgtctggatcgtcaaatccctttcctgtatgcctcctctgctgcaacttat
ggtggtcgtagtgacaattttattgaagctcgtcaatatgaaaagcctctcaatgtttat
ggttactctaagttcctgtttgatcaatatgttcgtgatattttgcctcacgcagattcc
cagatttgtggtttccgttatttcaatgtgtacgggccacgggaagggcataagggcagc
atggcaagtgtcgcctaccatttgaatcatcagattcatcaaggccaaaatccgaagttg
tttgctggtagtgaacatttccgccgcgatttcatctacgtcggtgatgttaccgcagtc
aatctgtggttctggaaaaatagcatttccggtatttttaattgtggaacaggccgcgct
gaatctttccaggctgttgccgatgctgtcactcaattccaccaagaaaaatcgcctgtt
gtggaatacatcgatttccccgaaaagttaaaagggcattatcagcgttttactcaagca
gacctgacaaaacttcgtgccacgggttatgaaacaccgttcaaaaccgtcgcggaaggt
gtcgctgaatatatgcaatggctcaatcaggataattaa
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