Xanthomonas sacchari: SB85_04040
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Entry
SB85_04040 CDS
T03566
Name
(GenBank) exodeoxyribonuclease
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SB85_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_04040
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SB85_04040
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SB85_04040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJC45062
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All DBs
Position
996946..998286
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AA seq
446 aa
AA seq
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MSDRADQILSPSQLNTLARDLLESAFPLAWVEGELGNVTRPSSGHLYFTLKDARAQVRCA
MFKPKSQWLRFVPREGLRVLARGRLTLYEARGDYQLVLDHLEEAGEGALRRAFEELKARL
AAEGLFASERKRALPGFVRRLAVITSPSGAAVRDVLSVLGRRMPLLQVDILPSLVQGESA
AAQIAALLRQADASGRYDAILLTRGGGSLEDLWAFNDEHLARTIAAAVTPVVSAVGHETD
VTLADFAADLRAPTPSVAAELLVPDQRDLGARLRSQHAALLRWQQHRLRQAQQRADRALL
RLQAQSPQVRLQLLQRRQHEIGRRLAAVWRQQQERRHAQLRHAAAVLRAAQPQRRLAMLR
VRLLALGRRPQAAMARQLQTDAQRLRALARALETVSPLATVARGYSILTRVDDGSVVRSA
AQVAPGDRLRARLADGELQLRAERAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgcgccgaccagatcctcagccccagccagctcaacacgctggcccgcgac
ctgctggagagcgccttcccactggcctgggtggaaggcgaactgggcaacgtcacccgc
ccgtcgtccggccacctctatttcaccctgaaggatgcgcgcgcgcaggtgcgctgcgcg
atgttcaagcccaagagccaatggctgcggttcgtgccgcgcgaaggcctgcgggtgctg
gcgcgcgggcgcctgaccctgtacgaagcgcgcggcgactaccagttggtgctggaccat
ctggaggaagccggcgaaggcgcgttgcgccgggcgttcgaggagctcaaggcccggctc
gccgccgaaggcctgttcgccagcgagcgcaagcgcgccctgcccggcttcgtgcggcgc
ctggcggtcatcacctcgcccagcggcgccgcggtgcgcgacgtgttgagcgtgctcggc
cggcgcatgccgctgctgcaggtggacatcctgccgagcctggtccagggcgaaagcgcc
gcggcgcagattgccgccttgctgcgccaggccgatgccagcggccgctacgacgcgatc
ctgctgacccgcggcggcggctcgctggaggacctgtgggcgttcaacgacgaacacctg
gcacgcaccatcgccgcggcagtcaccccggtggtgtcggccgtcggccacgagaccgac
gtgaccctggcggatttcgccgccgacctgcgcgcgcccaccccgtcggtcgccgccgaa
ttgctggtccccgaccagcgcgatctcggcgcgcgcctgcgctcccagcatgccgcgttg
ctgcgctggcagcagcaccggctgcggcaagcgcagcaacgcgccgaccgcgccctgctg
cgcctgcaggcgcagagcccgcaggtgcgcctgcagttgctgcagcgccgccagcacgag
atcggacggcggctggcggcggtatggcgtcaacagcaggaacgccggcatgcccagttg
cgccatgccgccgcggtgctgcgcgccgcgcagccgcaacggcggctggcgatgctgcgg
gtgcgcctgctggcgctgggccgacgtccgcaggcggcgatggcgcggcaactgcagacc
gatgcacagcgcctgcgcgcactggcgcgcgccctggagacggtcagcccgctggcgacc
gtggcgcgcggctacagcatcctgacccgcgtcgacgacggcagcgtggtgcgctcggcc
gcccaggtggcgcccggcgatcggctgcgcgcacgcctggccgacggcgaactgcaactg
cgtgccgagcgcgcagagtga
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