KEGG   Xenopus tropicalis (western clawed frog): 100124743Help
Entry
100124743         CDS       T01011                                 

Gene name
setdb2, clld8, clll8, kmt1f
Definition
(RefSeq) SET domain, bifurcated 2
  KO
K18494  histone-lysine N-methyltransferase SETDB2 [EC:2.1.1.43]
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
xtr00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100124743 (setdb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100124743 (setdb2)
Enzymes [BR:xtr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100124743 (setdb2)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100124743 (setdb2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100124743 (setdb2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD ESM4
Motif
Other DBs
NCBI-GeneID: 100124743
NCBI-ProteinID: NP_001096194
Xenbase: XB-GENE-1219030
UniProt: A4IGY9
LinkDB All DBs
Position
2
AA seq 697 aa AA seqDB search
MERSTNARHSTLSSWTRESNTLSVLSKDVSLEDAKEYWKDCQADGKVDWIFEKLLNKLKI
LWQKIKDGSATNLEYVRAVILVNEAEQLEEDTETLHTDIQKENKVQENTDCAPERKEDSC
ADLNSDCETDVSGSECEHEDHSTVSPPATGAVCFGKHLCGPSCLSDINPSLLKKENPLNL
PVSCDFQRWRVKTNGSEYPPHILYKAPCGRSLRDSDEVHSYLTETGCHFLGVDNFSFSTQ
VQLESHLSIKQEIVQDCDISNDVESVPVSLSNEIDDTRPTNFIYRKTSWPPGYSINNFTD
IFVKCCSCTDGCLDISTCSCLQLTAQAFEKFTDSSLGIGPLGYKHKRLQEPVPTGLYECN
LSCKCDRTLCQNRVVQHGLQLRLQVFKTDTKGWGVRCLDDVDNGTFVCIYAGRILIRTAD
SSVKTTLEDSVACGNEAKEDNGSTSTLMLSKRKRKPSHSDSEVTVMHLTPYSMRSLGLSV
HRQSNTLSLTHLRSGGREISLEPFRRPKTKTSMLQKRRRQLIEEGACTVHNSSEEEGPTP
PQSPKQKFNAGRKIHRNENSDETASGYVSEESSSSVISGGHPSEKPTCRTKSKLNKMTPH
LSTSPEQTCEEDLHFLDASKEGNVGRFLNHSCCPNLFVQHVFVDTHQKSFPWVAFFTNSV
VKAGTELTWDYNYVIGTAPDQEIQCLCGQQTCKHKIV
NT seq 2094 nt NT seq  +upstreamnt  +downstreamnt
atggagcggagtaccaatgcacgccattcaaccctgagttcctggacacgagaatcaaat
acattatctgttttatccaaagatgtatcactcgaagatgctaaagaatactggaaagat
tgtcaagcggatggaaaagtagactggatatttgagaaactattgaacaagctcaagatt
ctttggcagaaaataaaagatggatcagcaacaaacttagaatatgtgagagctgtgatt
ttggttaatgaagcagagcaactagaagaggacactgaaaccctccacactgatatccaa
aaggaaaataaagtacaagaaaacacagattgtgcaccagaaagaaaggaggactcgtgt
gcagacctgaattctgattgtgagactgatgtttcaggttctgagtgtgagcatgaggac
cacagcacagtttcacctcctgccaccggggcggtctgttttggaaagcatttatgtggc
ccatcttgtctctctgacattaatccatctctgttgaaaaaagaaaaccctctaaacctc
ccagtgtcctgcgacttccagagatggcgtgtaaagacaaatggctccgaatacccgcca
catatcctatataaagctccatgtgggagaagcctgagagattctgatgaagtgcattct
tacctcactgaaactgggtgccactttttaggtgtggacaacttttctttcagtactcag
gttcagctggagagccatttatccatcaagcaggaaattgttcaggactgtgatataagc
aacgatgttgagtcggtgccagtttcactctccaatgaaattgatgacacaagaccaact
aatttcatctacagaaagacctcttggcccccaggatactccataaataattttacagac
atctttgttaaatgctgcagttgcactgatggctgcttagatatttcaacttgttcatgc
ctgcagctcaccgcacaagcatttgagaaatttacagattcatcccttggtattggtccc
cttggctataaacacaaaagacttcaagaacccgttcctactgggttatatgaatgtaac
ttgtcatgtaagtgtgatcggacgttgtgccagaatcgagttgtgcagcacggccttcag
ttgagattgcaggtgttcaaaacagatactaagggctggggtgtccgctgtctggatgat
gtagacaacgggacatttgtttgcatctatgcagggagaatactaatcagaactgctgat
tcttctgtaaaaaccacactagaggattctgtggcatgtggtaatgaagctaaagaagat
aatggaagcacttctactctaatgttaagcaaacggaaaagaaagccttcccattcagac
tctgaagtcacagttatgcatttaactccctacagcatgcgcagcctgggattatctgtc
cataggcaatcaaacacactcagtctaacacatctaagatctggtggaagagaaatatct
ttggagccgtttagaagacccaaaaccaagacctccatgctccaaaagcgtagaaggcag
ctgattgaagagggggcatgcacagttcacaacagttcagaagaggagggtccaacaccc
ccacagtcacctaagcagaagttcaatgcaggaaggaaaatacatagaaatgaaaattcc
gatgagactgcctcagggtatgtgtcagaggagagcagcagttcagttatatctggggga
catccttcagaaaaacccacatgcaggactaagtcaaagctaaacaaaatgactcctcat
ctatctacctctccggaacagacttgtgaagaagacttgcatttcttagatgcctcaaaa
gaggggaatgttggaagatttctaaatcacagctgctgtcctaatctgtttgttcagcat
gtatttgtggatacacaccaaaaaagttttccatgggtggcattctttactaacagtgta
gtaaaagctggaacagaactaacctgggactataactatgttattgggactgcacctgat
caggaaatccaatgcctgtgtggccaacaaacatgcaaacataaaattgtatga

DBGET integrated database retrieval system