Xenopus tropicalis (tropical clawed frog): 100127181
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Entry
100127181 CDS
T01011
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100127181 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100127181 (dtx1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100127181 (dtx1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100127181 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-RING_UBOX
zf-RING_2
zf-UDP
ZNF512_C2H2
Motif
Other DBs
NCBI-GeneID:
100127181
NCBI-ProteinID:
XP_002934314
Xenbase:
XB-GENE-481116
UniProt:
F7CWT1
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All DBs
Position
1:145034051..145066008
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AA seq
623 aa
AA seq
DB search
MSRPGVLLPVNGHNFGSQGGPPRVVVWEWLNEHGRWRPYTATVCHHIENALREDGRGRVA
LGQVDAQLTPYVIDLQTMHQYRQDTGTVRPVRRNFFEPSSAPGKGIVWEWENDAGSWTPY
DTEICIAIQNAYEKQHPYLDLTTLGFCYLVHFHSMCQVNRQTHRKRRLRRRMDLAYPLTM
GSIPKSQSWPVGSGSGLPCSCPQCLLVNSTRAASNAILASQRIKVPPGPPPALPPPPPPS
IHPPGLRQSNTYSGGAAGWGRTGEGVRSTGGIRNGSGFSRSQSVPGAAPYPGQNNLNRPG
EQRTSGSSSRASIPPGVPALPVKNLNGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPIL
HPPPVSKEDIKPVSGISGICRKTKKKHLKKSKNPEEVVRRYIQKVKSPPDEDCTICMERL
VTASGYDGVLSHRGIRGELVGKLGKCNHMYHVLCLVAMYNNGNKDGSLQCPTCKAIYGEK
TGTQPPGKMEFHVIPHSLPGYPDCKTIRIVYDIPSGMQGPEHPNPGKKFTARGFPRHCYL
PDNDKGRKVLRLLLAAWERRLIFAIGTSSTTGESNTVVWNEIHHKTEFGSNLTGHGYPDP
NYLDNVLAELHRQGVMEERCLPY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggccaggtgtccttttgccagtcaacgggcataactttggtagccaggggggc
cctcctcgtgttgtagtctgggagtggctgaatgaacatggacgctggagaccctacact
gctactgtgtgtcaccacatcgagaatgcccttcgagaggatggccggggacgggtggcc
ttagggcaagtagatgcccagctcacaccctatgttatcgacctgcaaactatgcaccaa
tatcgtcaggacacaggaacagttcggccagtgaggcgcaatttttttgagccatcctct
gccccagggaagggcatagtttgggagtgggaaaatgacgcgggttcctggaccccttat
gatacagagatctgtattgccatccagaatgcctacgagaaacagcatccttacctggac
ctcacaacccttggtttctgttatttggttcatttccatagcatgtgccaagtcaaccgc
cagacccaccgtaagcgcaggctaaggagacgtatggacctggcatatccactcaccatg
ggttccataccaaagtcccaatcttggcctgtgggatctggctcaggattgccctgctca
tgtcctcagtgcctccttgttaacagcactagagcagcctccaatgccatattggcatct
cagaggatcaaagttccacctggtcctccacctgccttgcctcctccaccccctccctcc
atacatccgcctggtttgagacaaagcaatacctacagtggaggagcagcaggctgggga
agaacaggagaaggagtgcgatctacaggaggtatcagaaatggctctggattctcccgc
agtcagagtgtgccaggtgcagcgccatatccaggacaaaacaaccttaacaggccagga
gaacagagaactagtgggagcagcagcagagcatctattccaccaggcgttcctgctctc
cctgtgaagaaccttaatggttcgggtcctgtacacccagcattggcaggaatgactggt
attttaatgtgtgcagctggattacctgtctgcctgacaagagcccccaaacctattctg
caccctcctcctgtcagcaaagaggacatcaaacctgttagtggcattagtggcatctgt
cggaaaactaagaagaaacacttgaaaaagagtaagaacccagaagaggtggtgcgcaga
tacatacagaaagtaaagtctcctcccgatgaggattgcaccatttgcatggaacgtctg
gtcactgcatcaggttatgatggtgttctcagtcatagaggcattcgtggtgagctggtt
ggaaagcttggaaagtgtaaccacatgtaccatgtgctgtgcctggtggccatgtataac
aatgggaataaggatggtagcttgcagtgtccaacttgtaaagcaatttatggagagaag
acaggcacacaacctccagggaagatggaattccatgtcatcccacactctctgcctggt
tacccagactgtaaaaccatacgcatcgtatatgatatcccaagcggcatgcaggggcct
gaacatcctaaccctggcaagaagtttacagccagaggatttccacgacactgctatcta
ccagataatgataaggggagaaaggtattgcgactcctactggcagcttgggaacggcgc
ttgatatttgccattggtacctcaagcacgacaggggaatccaacacagttgtgtggaat
gagattcaccacaagacggaatttgggtccaacctgacaggccatggttacccagatccc
aactatttggacaatgttttggctgaacttcatcgtcagggcgtcatggaggagagatgc
ctcccatactga
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integrated database retrieval system
