Xenopus tropicalis (tropical clawed frog): 100127727
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Entry
100127727 CDS
T01011
Symbol
hla-dqa1
Name
(RefSeq) major histocompatibility complex, class II, DQ alpha 1 precursor
KO
K06752
MHC class II antigen
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04514
Cell adhesion molecules
xtr04672
Intestinal immune network for IgA production
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100127727 (hla-dqa1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100127727 (hla-dqa1)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100127727 (hla-dqa1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100127727 (hla-dqa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100127727 (hla-dqa1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100127727 (hla-dqa1)
Exosomal proteins of epithelial cells
100127727 (hla-dqa1)
Exosomal proteins of breast milk
100127727 (hla-dqa1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
100127727
NCBI-ProteinID:
NP_001106538
Xenbase:
XB-GENE-5999632
UniProt:
A8WGZ0
LinkDB
All DBs
Position
8:72939510..72969846
Genome browser
AA seq
245 aa
AA seq
DB search
MLLLCALLALALKPSDAVTVDYFDYSALFYQTRRPTGEYLFDYNGNELFHVDLDSKSVVW
TLPGLSEHESFDPQGALQDINVARYNLDIGIKRSNSTAATNIPPLVNLYSSKPVVLGEPN
ILICFVKNIFPPVMNTTWIKNGEKIEEGFTETSYLPAQDHSFRKLHYLAFIPNEHDIYTC
EIEHWGLERPTRRVWQHDVPTPTSEAYQNVICALGLAVGIIGIIAGVMLIIKGMKQSAAQ
GRSQR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttctatgtgcgctgttagcgctggcgctgaagcccagtgacgctgtaacagtt
gattacttcgattattctgcgttattctatcagacccgcagacccacaggggaatatctg
tttgactataacgggaatgagttgttccacgtggatttggactcgaagtctgtggtttgg
acgctccccgggctgagcgaacatgaatcatttgatccacagggagccctgcaagatata
aatgtagcgagatataacctggacattggtataaagagatcaaacagcacagcagcgact
aacattcctcctttggtcaatctctactcctcaaagcctgtagtactgggagaacccaac
atccttatctgctttgtaaagaacatttttcctcctgtgatgaacacaacctggattaaa
aatggggaaaaaattgaagaaggatttacagagacaagctacctgcctgcacaggaccat
tccttccgtaaactccattatttggctttcataccaaatgagcatgatatttacacatgt
gagatagagcactggggcttggaaagacccacaaggcgtgtttggcaacatgatgtccca
acacccacctcagaggcctaccaaaatgtgatctgtgcattgggtctggcagttggaatc
attgggattattgctggagtcatgctcatcattaaagggatgaagcaaagtgctgcacag
gggaggagccagcgttaa
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integrated database retrieval system
