Xenopus tropicalis (tropical clawed frog): 100135732
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Entry
100135732 CDS
T01011
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100135732 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100135732 (vcpip1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100135732 (vcpip1)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C64
100135732 (vcpip1)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
100135732 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
DUF5560
Motif
Other DBs
NCBI-GeneID:
100135732
NCBI-ProteinID:
XP_002935366
Xenbase:
XB-GENE-977494
UniProt:
A0A6I8Q5U4
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All DBs
Position
6:complement(119013873..119026503)
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AA seq
1194 aa
AA seq
DB search
MSQPPPSPSQMQPQRRRDRRILSGTCPDAKCRARLFFPAQGSASIECTDCGQRHEQRQLL
EVEEVTEPDVVLHNLLRNALLGVAAPPRRSTDMAKVMGLSNYHCKLLSPILARYGMDKQT
GKAKLLRDMNQGDVFDCSLLGDRAFLIEPEHVDTVGYGKDRSGSLIYLHDTLEDIKKSNL
NQECIIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHLKENLDRYKALFHDFIDA
AEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPVILLDSLSGMRSSGDYSATFL
PGLIPVEICKGKDGQLNKPICIAWSSSGRNHYIPLVGIKGGSLPKLPSRLLPKAWGVPQD
LIRKYIKLEEDGSCVIGGDRSLQDKYLLRLVAAMEEVFMNKHGIHPSLVSDVHHYFYRRT
GVIGVQPEEVIAAAKKAVLENRLHKCLICGALSELLVPPEWLAPGGKLYNLAKTTHGQLK
PDKNYSFPLNNIVCSYDAANDILVPDYNLSNLTSCNWCRGTSVRRVRNDSSIVYLDGDRT
NTKSFGGKCGCGFKHYWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDVTLNSNVY
DVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPNDYTPVAIDGAHVQRMEDVKHEQ
EPESHLPTKIILTGQKAKTLHKEELNMSKTERKLQQSITEQAAVMQKRKTEKIKQEQIGP
TRSSSPGAARESPPSGPSTPTKTPYSPTASKEKKIRITTNDGRQAMLTLKSSTTFSELQE
GIAKELAIPPHLQSIRYGFPPKELVPPKEGLENEPVPLQHGDRVTVEILKGKEKPQPNMS
HSVHEVTEDDAAMSSNSVSKELQEQIDKEMYSLCLLATLMGEDVWSYAKGLPHLFQQGGV
FYNIMKKNMGMADGKHCTFPHLPGKTFVYNAAEDRLELCVDAAGHFPIGPEVEDLVKEAL
NQLRSEAASKSRESSPSHGLIKLGSSGVIKKKSEQQHNVTAFQGKGHSLGTASSSPELKQ
KPRDVTKHGTTTDFNSTLTYSEPSPFQSTTSDNEPIRVAPGVITMRDSRQLDPNLIEAQR
KKLQEMVSSIQASMDKHLRDQNDEQLVVTDASPKKGEWNSAKSGSSQEQVMGSVIVNTEA
TVASEARSISVQSSVEAKLSGRLKIQPGVSTDDPEEMDSQDTEMINVAEPMDHS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcctcccccttcaccgtcgcagatgcagccgcaaaggaggagagatcggcgc
atcttgtctgggacctgcccagacgctaagtgccgggcccggttgtttttccctgcccag
ggctcggctagcatagagtgtacggactgcggccaaaggcatgagcagaggcagctgctg
gaggtcgaggaagtgaccgaaccggacgtggtgctgcataacctgctgcggaacgcactg
ctcggtgtggcagctccgccccggaggagcacggacatggctaaagtcatggggctctcc
aactatcactgcaagcttctctcccccatcctggcccgctatggcatggataagcaaacg
ggcaaggccaaactactgagagacatgaaccagggggacgtgtttgactgttccctgcta
ggggaccgggcctttcttatcgaacccgagcatgtggataccgtcgggtatgggaaggac
cgctcaggcagcctcatctacctccatgatactctagaggacattaaaaagtctaacctt
aaccaagagtgcatcattcctgtgcatgtggatggggatggtcactgccttgtccatgct
gtgtccagggcgctggttggccgggagcttttttggcatgctctgagagagaacctgaag
aaacacctgaaggaaaatctggacaggtacaaagcccttttccatgacttcattgatgcg
gctgaatgggaagatattatcaacgagtgtgaccctttgtttgtgcctccagaaggagtt
ccactaggactgagaaatattcacatttttggcctggccaatgttcttcaccgtcccgtt
atccttcttgactcccttagtgggatgaggagttctggagattattcagccacttttctt
ccagggttaataccagtggagatttgtaagggtaaagatggacaattaaataagccaatt
tgcattgcatggagtagttctgggcgcaaccattatatccctttggttggtatcaagggc
ggctctttaccaaagttgccttcaagactgcttcctaaggcatggggtgttccccaagat
ttgataaggaaatatataaaattagaggaggatggcagctgtgtgattggaggtgacagg
agtttgcaggacaaatatttgctgaggttggttgctgcaatggaggaagtattcatgaac
aagcatggaatccatcccagtttagtatcagatgttcatcattatttttatagaagaact
ggggtcattggggttcagcctgaagaagtgattgctgctgcaaagaaggcagtattggaa
aaccgcctccataaatgtctcatttgcggggcactgtcagaacttctggttcctccagag
tggttagccccaggagggaagttgtataacttggcaaaaacaacccacggtcaactaaaa
ccagataaaaattatagttttcctcttaacaatattgtttgctcttatgatgctgcaaat
gacattttggtacctgactataatttaagtaatctgaccagttgcaattggtgccgtggt
acctcagtacggcgagtaagaaatgattcctccattgtctatctggatggggacagaact
aatacaaaatcctttggaggtaaatgtggttgtggcttcaaacactactgggatggcaag
gaatacgataatttgccagaagcctttcctattacactcgagtggggaggaagggttgta
agggaaacagtatactggtttcagtatgaaagtgatgtgactttaaatagcaatgtatat
gatgttgctatgaaattagttactaagcacttccctggggaatttggcagtgaaatactg
gtacaaaaagttgtaaatacaatattgcatcagactgccaaaaagaatcccaatgattat
acaccagtagctatagatggcgcccatgtccaaagaatggaggacgttaaacacgaacaa
gagcctgagtcgcatttgccgacaaaaataattcttactggtcagaaagctaagactttg
cataaagaggagttaaacatgagcaaaactgaaaggaaactgcagcaaagcattacagaa
caagcagctgtaatgcagaaacggaaaacagaaaaaatcaagcaagaacagataggacca
acacggtcttcatcccctggagctgccagagagagcccaccatcaggcccatcaacacca
acaaaaactccctactctccaaccgcttctaaagaaaagaaaatacgaattacaaccaat
gatgggaggcaggcaatgcttaccttaaaatcctctaccacattctcagaactgcaagaa
gggattgctaaagaattggctattcctccacatttacaaagcatccgctatggatttcct
ccaaaagagctggttccaccaaaggagggcctggaaaatgagccagtcccattacagcat
ggtgacagagtgacagtagaaattttaaagggtaaagaaaaaccacagcccaacatgtcc
cattcggtccatgaagtaacagaggatgatgctgcaatgtctagtaactctgtttcaaag
gagcttcaagagcagattgacaaggagatgtactcattatgtttgctggcaactctcatg
ggggaagatgtttggtcctatgctaagggacttcctcatttgttccagcaaggaggtgtc
ttttacaatatcatgaagaaaaatatgggaatggcagatgggaagcattgcacatttcct
catcttcctgggaaaacctttgtctacaatgctgctgaagaccggctagaactttgcgtt
gatgctgcaggccattttcctataggtcctgaggttgaagatttggtgaaagaggctttg
aatcaactgcgttctgaagcagcttcaaaaagtagagagtctagtccttcacatggattg
ataaagctgggcagcagtggggtgataaagaagaagtctgagcagcaacacaatgtgaca
gcatttcaagggaaagggcactccctaggaacagcttctagtagccctgagcttaagcag
aaaccaagggatgtaacaaagcatggtacaactacagatttcaatagcactttgacatat
tcagaaccttcaccctttcagtccactaccagtgacaatgagccgatcagagtagctcca
ggtgtaataaccatgagagatagcaggcaacttgaccccaatttaattgaggcccagcgg
aaaaagttgcaagaaatggtttcttctattcaggcttcaatggataagcacttacgggat
cagaacgatgagcaattggtggtaactgatgcatctccaaagaagggagaatggaattct
gcaaagtcgggaagcagtcaagagcaggtgatgggaagtgttatagtgaacacagaagca
actgtggcttctgaagcaagaagtatcagtgtacaaagctctgtggaagcaaaattgtct
gggaggcttaaaattcaacccggggtatctacagatgatccagaagagatggacagccag
gatacagaaatgatcaatgtggctgagcctatggatcattcatga
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integrated database retrieval system
