Xenopus tropicalis (tropical clawed frog): 100170546
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Entry
100170546 CDS
T01011
Symbol
tsc2
Name
(RefSeq) tuberin
KO
K07207
tuberous sclerosis 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04115
p53 signaling pathway
xtr04140
Autophagy - animal
xtr04150
mTOR signaling pathway
xtr04218
Cellular senescence
xtr04910
Insulin signaling pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100170546 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100170546 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
100170546 (tsc2)
04218 Cellular senescence
100170546 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100170546 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100170546 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100170546 (tsc2)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100170546 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
100170546
NCBI-ProteinID:
NP_001123795
Xenbase:
XB-GENE-981706
UniProt:
B3DLU6
LinkDB
All DBs
Position
9:18944517..18976769
Genome browser
AA seq
1753 aa
AA seq
DB search
MAKQMGKDPGLKEKVKMLLGLVPARVKTKPSEWKHPEYVITADLMKELSSESALHVRIRA
IIQVCELAKTKKFEEHAVEAICQSVGDLIQPEQPVEARHHVLQLLKAIIVGQQFFWCDFP
QGERLGVLRAHFFRVIKEYPMNEDLAERLEVFKALTDNGREIAYLEEELAVFVLQWMEIG
LTPDFLHVLVNLVKFNSCYLEHFIAPMVQMICLLCNRTTSPYDIEVSLKVLDAVVCYNCL
PSESIPIFVMTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYTMSRIMEDRAHMEDAPL
LRGAVFFVGMGLWGAHRLFCLKNSPISVLPSFLKAMNCNNAVVSYEIVLSVTRLIKKYGK
DVQAATWDVLLDIIERLFQQLQVLRSQELKAAVHNLMTTTEELYNQNGFHGDEERFFELV
EKGADERPFASVVNLITYRAQSIHPGKEGWIMNLQKLMDRYFRSESRSVVRMKILDVLSF
ALSINRQFYEDELIEKVVTCQLAHIPEDKDHQVRKLATQLLVDLAECCHSCHFNSLMDII
EKVVNRSLSTPESGHDSSSLEDVKTSVLGLMVILQTKLYILPASHAMRVYEMLINHIQLH
YKYNYSSPIATSIRLQVFDFLLHLRADSLRRVGLPNKDGAFRFSPYCLCESVNEQEKRAA
ERKPAGTLSPPSGSPSVPSQTVTPRMGFLPFSLAFGVILQCLKQETDWKVLKLVLNKLPE
CLRYKLLILSSPCNIDQLAGSLCAMLTDKTASDRLYITPDGFSRTDLQLAVVPVLTALTS
YHQHLELSKQREMVRCLETGLIFRCGKQCVVALSMCVIEMPSILIKSLPVLIVKLTHISA
TVTMAIPMLEFLSTLVRLPHLYANFAAEQYASVFAISLPYTNPSKFNQYIVFLAHHVIAM
WFIRCRLSLRRDFVPYITKGLRSNVLLSFDDTPEKGSFRARSTSLNERPKSRMQTSVTSS
SLSSADESSMAQADDSLKNLHLELTEICLDMMARYAFANFTAVPKRSPVGEFLLDGGRTK
TWLVGNKLITITTSVGMGTRSLLGLDTGGENHGDTENSSPVQTEQVKEFPSMLDLQQRKP
GMQTPRHRVRSMSGGTTLRAGSLEGTPLSASMGQPGATPVTRAEKPSRRTQMKKEKTTLA
DFVPVLTQGWAEVLVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERLKEH
RETALYKSLSVPASTLSPSTTKCTLLQRANTESCAVPEEGAQADGEAEEVSTPGGSQELE
DFEAVVSEDTTSEEKSAKKMECISRSSSTSSQEESAATQTEESEAGGIPIEGSTREVPFQ
TLSKSSSSPELQTLQELPKELGPTEDIKKPSADFKTLPHVENPLSHRTKSEEERSAGALA
KPEGEMRLEPELPVLSPQSPTGHRPRGHTISDSEPSRRGRRFQVDPFKNSTKSTKAEKVP
GIDPSFVFLQLYHSPFFGDESNKPILVPNTQTFERTMGLLDRIPPYDTHKIGVLYVGEGQ
VGNERAILSNEHGSYRYTQFLTGLGKLIELKDTQPDKIFLGGLDGCGDDGQFTYCWHDDI
MQVIFQITTLMPNKEIDPNRCNKKRHVGNNFVNIIYNDSGEFYKLGTLKGQFNFVDVNIQ
PLDCESNLVTLQCRKDMEGLVDTSVAKIVSDKNLPFLARQMALHSNMASQVHHSRSNPTD
IYPSKWIARLRHIKKMRPKIQEELQELSANMPYQVPTMANKPPSQNPQTPPGAFETGQRT
RLISAVDDFTEFA
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatgggtaaagatcctggcctgaaggaaaaggtgaaaatgctattggga
ttggtgcctgcacgagttaaaaccaagccttcagagtggaaacatccggaatatgtcatt
actgcagatttaatgaaggagctgagctctgagtctgctctccacgttcgcatccgtgca
attattcaggtctgtgagcttgcaaagacgaaaaaatttgaagagcatgcagtagaagca
atctgccaatcagttggtgacttgatacagcccgaacagccagtagaagctcgacatcac
gttctgcagttactaaaggccattattgtggggcagcaatttttctggtgtgactttccc
cagggtgaaagacttggcgtccttcgtgcccatttcttccgagtcataaaagagtatcct
atgaatgaggaccttgcagagcgactggaggtttttaaagctctcaccgacaatgggcga
gaaattgcttacttagaagaagagctcgctgtcttcgtcctccagtggatggaaattggt
ttgactccggatttcctgcatgttttagttaacctggttaagttcaatagctgttacttg
gaacactttattgctcctatggtgcagatgatatgcctcctctgtaatcgcacgacatct
ccttacgatattgaggtttccttgaaggttctggatgcagtggtctgctataactgcctt
ccatcagagagcattcctatatttgttatgaccctgtgccgcacaataaatgttaaggag
ctgtgtgaaccatgctggaagctgatgcgaaaccttctgggcacccatcttgggcacagc
gccatttacactatgagtcgtataatggaggatagagcccacatggaagatgcccctttg
ctaagaggagctgtgttctttgttgggatgggtctctggggagctcacagactcttctgt
ctgaagaactccccgatatctgttctcccatctttcctgaaggctatgaactgtaacaat
gccgttgtctcctatgagattgtcctctctgtcactcggctaatcaagaagtacggcaag
gatgtgcaggctgccacgtgggacgttctccttgatatcatcgagcgattattccagcag
cttcaggtgctgcggagtcaggaattaaaggctgcggtgcacaatctcatgaccaccaca
gaggagctttataaccagaacggattccatggagatgaagagagatttttcgagctggtt
gaaaaaggggcagatgaaagaccttttgcatctgttgtgaaccttatcacctacagagct
cagtccattcaccctgggaaggaagggtggattatgaatctacagaaactgatggataga
tatttcaggagcgagtctcgcagtgttgtacgcatgaaaatcttagatgttctgtccttt
gcgttgagcatcaatcgccagttttacgaggatgagttgatcgagaaggtagttacttgc
cagctagcccatatacccgaggataaggaccaccaggtgcgcaaactcgcaacacagctc
cttgtggacctggctgaatgctgtcactcctgccacttcaatagtctcatggatatcatt
gagaaggtggtgaaccgttccttgtccacaccagagtcaggtcatgattcttcttctttg
gaagatgtgaaaacctctgttctggggctgatggttattctacagaccaagctatacatt
ctgccagccagccatgccatgcgtgtgtacgagatgctgattaatcatatccagcttcac
tacaaatacaattacagctcacccattgctaccagtatacgcctccaggtttttgacttc
ctcctacacctccgagctgactctttgcggcgtgttgggctacctaacaaagatggcgcc
ttcagattcagtccctattgtctttgtgaatctgtaaatgaacaagagaagagagcagct
gaacgcaagccagcaggcaccttgtcacccccctctggtagccccagtgtcccatcacag
actgtcactccacgcatgggattcttgccattctcactagcatttggggttatcctgcag
tgcctaaagcaggaaactgactggaaagtcctgaaactagtcctcaacaagctgccagag
tgtctgcgttacaaactgctcattctgtcatctccctgcaatatagatcaactggctggc
tctctctgtgctatgcttacagacaagactgcaagtgatcgcctttacattactcccgat
ggcttctctcgtactgaccttcagctggcagtggttcctgtactgacagccttaacctca
taccaccaacacctagagctctctaaacagagggaaatggtaaggtgtctggaaacaggc
ctgatctttcgctgcggcaagcagtgcgttgtggccctttccatgtgtgtgatcgagatg
ccaagcattctgataaaatccctcccggtccttatcgtgaagctaacccatatctcggcc
actgtcaccatggccataccaatgctggagtttctttcaactttggtccgcctgccccac
ttatatgcaaactttgccgcagagcagtatgccagtgtgtttgccatctcccttccctac
accaacccatcaaagtttaatcaatacattgtattccttgcacaccatgtcattgccatg
tggttcatccggtgcagactatccctacggagagactttgtgccatatataacaaagggt
ttgcgatccaatgtcctgctgagctttgatgacacaccggagaagggcagctttagagct
cgcagcaccagcttgaacgagagacccaaaagccgtatgcagacttctgtcaccagctcc
agcttgagttcagctgatgagagctctatggcccaggctgatgacagcctgaaaaacctt
cacctggaattgaccgaaatctgcctggatatgatggcacgatacgcctttgccaacttc
acagccgtgcccaaaaggtcgcctgtaggtgagttcctgctggatggcggaagaacgaag
acctggctagttgggaacaagctgattaccattacaacaagtgtgggcatggggacacgt
tctcttcttggcctggatacaggaggggagaaccatggtgacactgagaacagctccccc
gtgcaaacagagcaagtcaaggagtttccgtccatgctcgatcttcagcaaagaaagccg
ggtatgcaaacgccccgtcacagagtccgctccatgtctggagggactacactgagagct
ggatcactagaggggactcctctttcggccagtatggggcagccgggggccactccagtg
accagagcagagaaaccttcccgtaggacacagatgaagaaagaaaagaccaccctggct
gactttgttcccgtgctgacacaaggctgggcagaggtattggttcgcagacccacaggt
aacaccagctggttgatgagcctggaaaatcctctgagccccttctcttctgacataaac
aacatgccgctgcaggagctttctaatgccctaatggcagccgagaggctcaaggagcat
cgggagacagcgctctacaaatctctctctgtgccagcttcaactttatcaccctcaaca
accaagtgtacccttctacagcgggcaaacacagaatcttgtgctgtgccagaggaaggg
gcgcaagctgatggggaagcagaggaagtgtccactcccgggggctctcaagagctggaa
gattttgaggctgtggttagcgaagacaccactagtgaagagaagagtgctaagaagatg
gagtgcattagcaggtcttcatccacatccagtcaggaagagtctgctgctacccaaacg
gaggaatccgaggctggtggaatacccattgagggctccactcgggaggtcccatttcag
actttgagcaagtccagctcatctcctgaacttcagaccttgcaggagcttcctaaagag
ttgggccctacagaagatataaagaagccttctgcagacttcaaaacactaccccatgta
gaaaaccctttaagccacagaactaaatctgaagaggaacgcagtgctggggcattagcc
aaaccagaaggcgaaatgcgacttgaaccagagttgcctgttctgtccccacaatctcca
actgggcaccgcccaaggggtcacactatctctgattctgagccgtcccgcagaggcagg
agatttcaggttgatccttttaagaacagcaccaaatccaccaaagctgagaaagtgcct
ggaatagatccaagctttgtatttttgcagctgtaccattccccattctttggtgatgag
tccaataagcctatactggtccctaacacacagacgtttgagagaacaatgggcctccta
gatcgaatcccgccctatgacacccacaaaattggtgttctttatgttggagaggggcag
gttggcaacgagcgcgcaatcctatccaatgagcatggctcgtaccgctacacacagttc
ctcacggggcttgggaagctcatcgagctgaaagacactcagccagacaagatcttcctg
ggagggttggacggttgtggagatgacgggcagttcacctactgctggcatgatgatatt
atgcaagtcatttttcagatcaccaccctgatgccaaacaaagagatagatccgaaccgc
tgcaacaagaaaaggcacgtgggcaacaactttgtcaatatcatctacaacgactcgggc
gagttctacaagttgggcaccctcaagggtcagttcaactttgtagatgtcaacattcag
cctttggactgcgagagcaacctggtgacactgcaatgccgaaaagatatggaaggcctt
gtagataccagcgtggcaaaaattgtgtctgacaaaaacctacccttcctggcccgccag
atggctctacattcaaatatggcttcacaagtccatcacagcaggtccaaccccacagat
atttacccttctaaatggattgccaggctgcgacacataaagaagatgagaccaaagata
caagaggagttgcaggagctgagtgccaacatgccctaccaggtccctactatggccaac
aagcccccttcacaaaacccacagactccccccggcgcatttgaaaccggccaaaggaca
aggctcatttctgctgtggacgatttcacggagtttgcttga
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