Xenopus tropicalis (tropical clawed frog): 100216261
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Entry
100216261 CDS
T01011
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100216261 (tdrd1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100216261 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
Motif
Other DBs
NCBI-GeneID:
100216261
NCBI-ProteinID:
XP_004919429
Xenbase:
XB-GENE-6455203
UniProt:
A0A6I8RMG9
LinkDB
All DBs
Position
7:3909928..3962851
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AA seq
1165 aa
AA seq
DB search
MTQKVHRANEIQIRAPQPSLRCPRSFPPFPLFTDGAAKNDGSEGIPDNSKGKEIKKIVGS
DMDVKGPALKPRSSPSSSESILSIGYEPTLFNSIKPVARPTSCNHCGLYGARRCSQCRQA
YYCSADCQRKDWSAHSIFCKPLAAKEQGACRSPTGGGEQIVPRRGEASPVGNSPKTEELV
KKIMFSDLQESGLREGKESQGFVLDFLSPSKFNIQVCNTKSLDSLVKVSTLLKEIYTKPE
NLKKGYTPAIGEVCVARYAQDQNWYRVMVHSLDAQMKMAQVLYLDYGNTEAVSIDDVQQM
HKDVELFPPSAIKCFLANIAAPPCGWTPECLVDVRKLLLGKKVTFTVLRIEQEEPPIYGV
DVTLPSSGDRVGKYLLDKGYCFSPEVKSKMKRCSSETDSILDKAANPEETSTELPPTLKV
VSVSAGDIFNAVITDIQTPSRFFCQQLQNGQQLAELMESMEKHYKTAPVSPGFSPIAGEI
CSALFTEDNRWYRATVLDRVSEDSALVGYVDFGNVEHLPVSRLRPIPARMLAFPLQAIQC
SLEGVRPASKTWTKEATTKMASLVANKMITVRVITESEGSLMVELLDGSVNPELDIARQL
ILAGLAVDKEAGVGMDEGSSGALAGTGGELMDDSGAKPGQWTSAELPLGRAVDVSVCMLY
SPGEFFCQLCNEKDAKSLTELNRSLGQHCQKGSATQYNPKAGKICCAFFSGDGNWYRAMV
MGVEQKGTKVRFMDYGNTEELEAGELCDIPSQLLELPFQAIRCSLTGVKPIGEKWDRDAI
IAFQSSVAGVKLKAKAVGKNDNGYRVELVASESGSSVSEALIAEKVAVHDTAQEAGEAGD
SHPPRQKPTGRAENISMDGSGDKGPQSTKTHTPKVPDQRETLQASPAPPKEKEACVRTPP
REDSPSKTNGPPQGTKMEEAGVARCWTSIELPLHEAAQALVLCVISPDLFYAFPKENRVD
VGKLQQTMIEMAAYCSIQSDCQNFRPAVGDACCARFTGDGQWYRAIVLGTSETEAEVAYA
DYGNTESLPYSSLVAIKESFLDPPVQIIKCRLTGVKPLDAEWIPAATRLLRHILLGCQLT
VTAMALQAGVHSVAVEIMKETGALLVQDKLINEGMARQSNSGVNKSQCKERDECCCCQDL
RIRVEKMEAILQHLMNELELKAPRN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaaggtccatcgcgccaacgagatacaaattcgagctccgcaaccttccttg
aggtgtccccgatctttccccccattccctctgtttaccgacggggctgcaaaaaatgat
ggatctgaaggaatcccagacaattctaaaggaaaagagataaagaagattgttggttca
gatatggatgtcaagggccctgcgttaaagccgagaagctcaccgtcatcctctgaaagt
atcctgtctattggctacgaacccactctctttaattccataaagcccgtcgctcgaccc
accagttgtaatcactgtggtttgtatggcgctaggagatgctcccagtgcagacaggca
tattactgctctgctgattgccagaggaaggattggtcagcacattccatattctgcaaa
ccattggctgcgaaagagcagggtgcttgcaggtctcccacgggtggaggagaacagatt
gtgccacgcaggggtgaagcatcgcctgttggcaactcccctaagactgaggagcttgta
aagaaaatcatgttctccgatctgcaggaatcgggactgagagagggcaaggaatctcag
ggctttgtactggatttcctaagccccagtaagttcaacattcaagtctgtaacactaaa
tcacttgattcgctcgtcaaagtatcaacattattgaaagaaatctacacaaaacccgag
aacctaaagaaaggttacacgcccgccattggggaggtttgtgtggccagatatgctcaa
gatcagaactggtacagagtaatggtgcacagtcttgatgctcagatgaagatggcacag
gtcctgtatcttgactatgggaatacggaggccgtttctattgatgatgtgcagcaaatg
cacaaagatgtagagctgtttcccccttctgcaataaagtgcttcttggctaatattgcg
gcacctccatgtggttggaccccagagtgcctcgtagatgttagaaaactgctcttgggg
aagaaggtcaccttcactgtccttcgaattgagcaggaagaacccccaatatatggggtg
gatgttactttgccgagctcaggtgaccgtgttgggaaatatctgcttgataagggctat
tgcttctctccagaagtaaaaagcaagatgaagaggtgcagctctgaaaccgattccata
ttggacaaagctgcaaatccagaagaaacttccacagagcttccaccaaccctgaaagta
gtgtcggtatctgctggcgatattttcaatgcagtgatcacagatatccagaccccaagc
aggttcttctgccagcagttgcaaaatggacagcaactggcagagttaatggagagcatg
gaaaagcattacaaaacagcacccgtcagtccaggattttctccaattgccggggagatt
tgttctgctctatttacagaagacaatcgctggtacagagccacagtcctggacagggtg
tcggaggattcagccctagtcggctacgtcgattttgggaatgtggagcacttgccggtc
tccaggctgcggcccattccggccagaatgttggcatttcctttacaagcgattcagtgc
agcctggaaggggtaagacctgcctccaagacctggaccaaggaagccacgactaaaatg
gcatcactcgtggcaaacaagatgattactgttagagttattactgagagtgaaggaagt
ttaatggtggagctgctggatggatctgtaaaccctgagctggacattgccagacaactc
atattggcagggttagctgtggataaagaggcaggtgttggcatggacgaaggttcaagc
ggtgctctagctggcactggtggagagctgatggatgatagtggtgctaaacccggacag
tggacatcagcagagctgcctctcgggcgtgccgtggatgtttctgtgtgcatgttgtac
agtcctggagagttcttctgccaactctgtaatgagaaagatgccaagtctcttacggaa
ttgaaccggtcgctgggacagcattgccagaagggttcggcaacacaatataacccaaaa
gcagggaagatttgttgcgccttcttttcaggtgatgggaattggtaccgagccatggtg
atgggtgttgaacagaaaggcaccaaggtgcgctttatggactatggaaacacagaggag
ctggaagcaggcgagctctgcgacatcccatcccaattactggagcttcctttccaagca
atcagatgcagtttaacaggtgtgaaacccatcggagagaagtgggacagagacgccatt
attgcctttcagagcagcgtagcaggagtgaagctcaaagcaaaagctgtcggcaagaat
gacaatggctacagggtggaactcgtggccagtgagagtgggagcagtgtgagtgaagct
ttgattgcagagaaggtggctgtgcatgatacggcccaggaggctggagaagccggggat
agccaccccccaaggcagaaacctacaggcagggctgaaaatatctctatggatggatca
ggggataaaggtcctcagagcaccaaaacgcacactcccaaggttccggatcagagagag
actcttcaggccagtcctgctcctcccaaggagaaagaagcttgtgtgagaaccccccca
agagaagactcgccaagcaagaccaatggacccccccaaggaaccaagatggaagaagcc
ggcgtggctcgctgttggacctccatagagctgccgttacatgaagccgcacaggcactg
gtgctttgtgtcataagtcccgacttgttctacgcctttcccaaagagaaccgagtggat
gttgggaaactccagcagacaatgatagagatggccgcttactgcagcatccagtctgac
tgtcagaatttcaggccggccgtcggggatgcttgttgcgccagatttacaggggacggg
cagtggtacagagccatagtgctgggcacctcagaaacagaggctgaagtagcctatgca
gattatggcaatacagaaagcctgccatattcttcccttgttgccataaaggagagcttc
ctggatcctccagtccagatcattaaatgtcgtctcacaggtgtgaagcctctcgatgcg
gaatggatcccagccgccactcggcttcttcggcacatactgctgggatgtcagcttact
gtcaccgcgatggccctgcaggccggggtacactctgtggctgtggaaataatgaaggaa
acgggggctctgctggtacaagataaattaattaatgaaggaatggccaggcagagcaac
tcgggggtcaataagagccagtgcaaagagagagatgagtgctgctgttgccaggacctc
aggatacgagttgagaaaatggaagcgatccttcagcaccttatgaatgagctggaactg
aaggctccccggaactaa
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integrated database retrieval system
