KEGG   Xenopus tropicalis (western clawed frog): 100488514Help
Entry
100488514         CDS       T01011                                 

Gene name
cacna1e, ca(v)2.3, cav2.3
Definition
(RefSeq) calcium channel, voltage-dependent, R type, alpha 1E subunit
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
xtr04010  MAPK signaling pathway
xtr04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100488514 (cacna1e)
   04020 Calcium signaling pathway
    100488514 (cacna1e)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xtr04040]
    100488514 (cacna1e)
Ion channels [BR:xtr04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   100488514 (cacna1e)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Motif
Other DBs
NCBI-GeneID: 100488514
NCBI-ProteinID: XP_017949086
Xenbase: XB-GENE-1012852
LinkDB All DBs
Position
4
AA seq 2144 aa AA seqDB search
MILATIIANCIVLALEQHLPGDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGLVFHKG
SYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKACYRNNSGMELDPMDPPHPCGVPR
CPAGYECKEWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFI
PLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEE
VMLAEENKNSGTSALEVLRRATIKRSRTEAMNRDSTEDHCVDISSVGTPLARASIKSTKM
DGASYFRHKEKLLRVSVRHMIKSQVFYWMVLGVVALNTFCVAIVHHNQTLWLSNVLYYAE
FLFLGLFLVEMAFKMYGMGPRLYFHSSFNCFDCGVTIGSIFEVLWAIFRPGTSFGISVLR
ALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFALLGMQLYGGRFNFN
DGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYFIVLTLFGNY
TLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNASCIEKERRK
RHTLSIWEQRTSQLRRHIQMSSQEALQSEELAALNPHSSIYRKTKEAAEQNTEKEEVHQD
AKLAIDPVEGPPEGEGSPSNRNLRENWRQKSRHGNSENTEPNGTTPEEAMRRRQSQRRSR
HRRVRTEGREQCSNPNSTSASREGGLDKVSAEDGRTIPEEKSNGEAKEVKGVDDEPLKIC
ISSRNCEDRNIRTLGCEGIALNDTPLQDVNSQEKDSSPPDLDCSEQALLGSIQSQESPNP
TSCSLPDVSSSTERVTESTVITLPDTGMPTDCTVVQMSEGRDGEVNFGSSQQEKEEEEAE
DGEERTIKRKEKLLESPKAIVPYSSMLIFSSTNPIRKVCHYIVNLRYFEMSILLVIAASS
IALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHEGSYFRDLWNILDF
VVVVGALIAFALANVLGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLK
NVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKETEKECIGSYIDHEKNKMEVKRRE
WKRHDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDITEEDRGPSRSNRMEMSIFYVIYF
VVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTF
QYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMLFSLECIL
KIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSSFNMSFLKLFRAARLIKLL
RQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIRLEEDSHINRHNNFR
SFFSSLMLLFRSATGEAWQEIMLSCLSDKGCEPDTSAASGHNENERCGTELAYVYFVSFI
FFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWAEYDRAACGRIPYKDMYKL
VRVISPPLGLGENCPYRVACKRLVLMNMPVSEDMTVHFTSTLMALIRTALDIKIAKGGAD
RQQLDSELQKDILAIWPNLSQKMIDLLVPMPRASDLTVGKIYAAMMIMDYYKQSKAKKQR
QQLEEQKNAPMFQRMEASALPEEILSNAKALPYLQQDTLSGLGGFPSLSPLSPEEVFQPP
CLDGEEEEDFEEQLSLEPEVREFRREQLPNRGSYIPVEMLERPASVRASSMPRLAENPQV
LSDVSSMRRSFSTTAEKRVRSSWLDEFTMDRSSTDCAYRYQRRSYHASLRLSAHRLNTDT
GHWSDNHRSGGRERGRSKERKHLLSPDPSRCNSEERSPQAACEHRDHQLSPGHTPSSVQI
LDSLSESCTPSDTSTPRRGRRQLPSVPPTPRPLISFSSLIRRQKHSPPPQNKNDTILPSE
PGLTESSCSLGGHQSSQSTPQHYISEPYLALHEEMQSSDCPAEDTLTFEVAVATSLGRSN
TIGSAPLRHGWQMPNGHYRRRRKGGIPPVIPSRELSDTEEDDRC
NT seq 6435 nt NT seq  +upstreamnt  +downstreamnt
atgatccttgccacaattattgcaaactgcattgtcctggctttggagcagcatcttcca
ggcgatgacaagactccaatgtctcgcagattggaaaagactgagccctatttcattggg
atattttgctttgaagctggaattaaaattgtcgctctgggactggtttttcacaaaggt
tcttatcttcggaatggctggaatgtcatggactttatagtagtgctcagtggcatcctg
gccacagctggaactcacttcaatactcacgtggacctgcgtactttgcgggcagtgcgt
gttctcaggccgttgaagctggtctcggggattcccagtttacagattgtgttgaagtca
atcatgaaggcgatggtccctctgctacagattggattgttgctcttctttgccatcctt
atgtttgctatcatcggccttgagttttacagtggaaagctacacaaggcctgttacagg
aacaactctggaatggagctagaccccatggatccacctcacccttgtggagtaccccgc
tgcccagctgggtatgagtgcaaggaatggatcggacccaatgatggaataacacagttt
gacaacatcttatttgcggtgctgacagtcttccagtgtataactatggagggctggacc
acagtgctgtacaataccaatgatgccttaggagccacatggaactggctgtacttcatt
cccctcattatcatcggatccttctttgtccttaatcttgtccttggagtgctgtccggt
gaatttgccaaagagagggaaagagtggaaaaccgccgggctttcatgaagttgcgcagg
cagcagcagattgagagggagttgaatggctatcgggcatggatagataaagctgaggaa
gtcatgttggcagaagaaaacaaaaattctgggacctctgctttagaagttcttaggcga
gcaaccattaaacgaagtagaacagaagccatgaaccgggactctactgaggaccattgt
gttgacatatcctctgttggcaccccccttgctagagcaagcatcaaaagtaccaaaatg
gatggggcatcatattttcggcacaaggaaaaactattgcgtgtctccgttcgtcacatg
atcaaatcccaggttttctactggatggtcctgggagtggtagcacttaacactttctgt
gtggctattgtccatcacaaccagaccctgtggctctcaaatgttctttactatgcagaa
tttctgtttcttgggttatttttggtggagatggcttttaaaatgtatggaatgggtcca
cgtctttactttcactcatccttcaactgctttgattgcggggtcacaataggtagtata
tttgaagtactttgggccatatttagaccaggaacttcctttggaatcagtgtcttaaga
gctctccgacttttgagaatcttcaaaataacaaaatactgggcctcactacgaaacctt
gtagtatcattgatgaattctatgaaatccatcatcagcctgctcttccttctattcctc
ttcatagttgtttttgctctccttggaatgcagttatatggtggcagattcaattttaat
gatggcactccttctgcaaactttgatacattccctgcagccatcatgactgtattccag
attctgacaggagaggattggaatgaagtgatgtacaatggtattcgctcccaaggtggt
gttcgatccggaatgtggtcttccatatactttattgtccttaccctttttggaaattac
acactgctaaatgtatttcttgccattgctgtggacaacctggctaatgcacaggagtta
actaaggatgagcaagaagaagaggaagctttcaatcagaagcatgcactgcaaaaagcg
aaggaggtcagccccatgtctgcacctaatgcatcatgtattgagaaggagcgcagaaaa
cggcacacattgtctatatgggagcagcgcacaagccagctaaggaggcacatacagatg
tctagtcaagaagctctccagagtgaagaactggcagcattgaatccacactccagtatc
tatcgcaagacaaaggaagctgctgaacaaaacacagaaaaagaagaagtgcatcaagac
gcaaaactggcaatagacccagttgaaggaccaccagaaggtgaaggaagcccttctaat
agaaatctcagggaaaactggcgccagaagtccaggcatggaaattctgaaaacactgaa
ccaaatggaacaactccagaagaagcaatgcgccgcagacaaagtcagagacgcagccgt
catagaagagttagaactgaaggtcgtgagcagtgtagcaatccaaacagtacctcagca
agcagagaaggtggtcttgacaaagtctctgcagaggatggaagaacaattccagaagag
aagagcaatggagaagccaaagaagtcaaaggggttgatgatgagcctctaaagatttgt
atatcttcaagaaattgcgaggacagaaatatcaggactttgggttgtgagggtattgcc
ttgaacgatacacccctgcaggatgtgaacagccaagagaaggacagtagccctcctgat
ttggattgcagtgagcaggctctgttgggcagcattcagagccaggaaagccctaatcca
accagctgcagtttgccagatgtgtccagcagcaccgagagagtcacagagagcaccgtc
attaccttaccagatactggaatgcccaccgactgcaccgtggtacagatgagtgaaggc
agggatggagaagtcaactttgggtcttcgcagcaagaaaaagaagaggaggaagctgag
gatggagaagaaagaactataaaaagaaaagagaaattgttggagtcccccaaagccatt
gtaccgtacagttcaatgctcatcttcagctccaccaatcccataagaaaagtatgtcat
tacattgttaacctacgatactttgagatgagcatcctgctggtaatagcagcaagtagt
atagccttagcagcggaggaccctgtactgaccaactcggaccgcaacaaagttcttcgc
tattttgactatgttttcacaggggtcttcacttttgagatgattataaagatgattgac
caaggtttgattttacacgagggctcctactttcgtgacctatggaacatcttggatttt
gttgttgttgtgggagccttaattgcgtttgccttagcgaatgttttggggactaacaaa
ggccgggacatcaaaaccattaagtctctacgtgtgttacgggtgctgcgtccactaaaa
acaatcaaacgcctgccaaaactgaaggcagtctttgattgtgtggttaactctttaaag
aatgtctttaatattctcatcgtatacaaactcttcatgttcatatttgctgtaatcgct
gtccagctgtttaagggcaagttcttctattgtacagacagctcaaaggagacagagaaa
gagtgcatagggagttacatcgatcacgaaaagaacaagatggaggtgaagcggagagag
tggaaaagacatgatttccattatgacaacataatatgggctcttcttaccctctttact
gtatcaacaggggaaggctggcctcaggttctgcagcactctgttgatataactgaagaa
gataggggtccaagccgaagcaaccgtatggagatgtccattttctatgttatctacttt
gtggtcttccccttcttctttgtaaatatatttgtggctctgattatcatcacattccag
gagcaaggagacaagatgatggaggaatgttccctagaaaagaatgagagagcctgcata
gactttgcaataagtgctaagccacttacacgatatatgccacagaacaggcacacattc
cagtaccgggtctggcacttcgtggtctccccatcatttgaatacactatcatggctatg
attgcactaaacacagtggtactcatgatgaagtattattctgcgccatacacatatgag
cttgcattaaagtatctcaatattgcattcacaatgctattttctctggagtgcatcctg
aaaataattgcatttgggtttttgaattactttcgggatacttggaacatttttgacttc
attactgtaattggtagcatcacggaaattattctaacagatagtaagttggtgaacacc
agcagctttaatatgagctttctgaagctgttccgagcggcgcgacttattaaacttctc
cggcaagggtacaccatccggatcctgctgtggacttttgttcagtcctttaaggcactt
ccttatgtgtgtcttctcattgcaatgttgttcttcatctatgccattattgggatgcag
gtgtttggcaatatccgcctggaagaggacagtcatattaataggcacaacaattttaga
agcttctttagttctcttatgttactcttcaggagtgccacaggagaagcgtggcaggag
atcatgctttcatgccttagtgataagggttgtgagccagacaccagtgcagcctctgga
cacaatgagaatgagcgctgtggaactgaacttgcatatgtttattttgtttcattcatt
ttcttctgctccttcctcatgctaaatctgtttgtggctgtcattatggacaactttgag
tacttgacacgggactcttccattttgggacctcatcacttggatgagtttgttcggata
tgggctgaatatgatcgagcagcatgtggcaggatcccctataaggatatgtacaaatta
gtccgagtcatctcgcctccgctcggcctaggagagaactgcccatacagggtggcatgc
aagagattggtcctgatgaatatgccagtgtcggaggacatgacggttcatttcacatca
actcttatggccctaatacgcacggcactggatatcaaaatagctaaaggaggtgctgac
aggcaacagctggactcagagctgcagaaagatatacttgccatttggccaaatctctcc
cagaaaatgatcgacttacttgtgccaatgccaagagcctctgatctgacggtggggaag
atttacgctgcaatgatgatcatggattactataaacagagcaaagcgaaaaaacaaagg
cagcagctggaggagcagaaaaatgcacctatgtttcagagaatggaggcttctgccctc
cctgaggagatcttatccaatgccaaagctttaccataccttcagcaagacactctatca
ggcctgggtggatttccttcactgagtcccttgtccccagaagaagtattccagccgcca
tgcctagacggggaagaggaggaagactttgaagagcagctgtctctggagcctgaggtt
agagagtttagaagggagcagctccctaaccgaggcagctacatccctgtggagatgctg
gaacgtccagcgtctgtgagagcttcttccatgccacgtctggctgagaatcctcaggtc
ctgtcagacgtaagctccatgcgtcgctccttctccacaactgcagagaagcgagtgcgc
agctcgtggctagatgagttcactatggacaggagtagcactgactgtgcatacagatac
cagaggcgcagttatcatgcatccttaagactgtctgcacatcgcctgaatacagataca
ggtcactggtcagataatcaccgttctggcggaagggagcgaggaaggtccaaagagaga
aaacacttgctgtcacccgatccttcccgctgtaattctgaggaaaggagcccacaagct
gcctgtgaacaccgagatcaccaactgtcccctgggcatactcccagtagtgtacagatt
cttgactctctgagtgaaagttgtaccccttcagacaccagcaccccaagaagaggccgt
agacagcttccttctgtgcctccaactcctagaccccttatctctttctcctcgttaatc
cgccggcagaaacacagcccccctcctcaaaataaaaatgatactatccttcctagtgag
cctggtctgactgagtcttcctgctcccttgggggtcatcagagctcccagtccacacca
cagcattatatctcagagccctacctggcactgcatgaggagatgcaaagctcagactgc
ccagcagaggacacactcacctttgaggttgctgtggctactagtctgggccgctcgaac
accattggctctgcccctctacgtcatggctggcaaatgcccaatggtcactaccggcgt
cgaaggaagggaggaattccaccagtgataccctccagagagttaagtgacacagaagag
gatgatcgatgttaa

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