Xenopus tropicalis (tropical clawed frog): 100488827
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Entry
100488827 CDS
T01011
Symbol
mtr
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00270
Cysteine and methionine metabolism
xtr00450
Selenocompound metabolism
xtr00670
One carbon pool by folate
xtr01100
Metabolic pathways
xtr01230
Biosynthesis of amino acids
xtr04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100488827 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
100488827 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100488827 (mtr)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
100488827 (mtr)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
100488827 (mtr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
CdhD
Motif
Other DBs
NCBI-GeneID:
100488827
NCBI-ProteinID:
XP_002933914
Xenbase:
XB-GENE-1001004
UniProt:
A0A6I8QLS5
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Position
5:41959550..42000466
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AA seq
1266 aa
AA seq
DB search
MPPTIQHAEPSGVRKRNLQEELDSVLRERIMVLDGGMGTMIQQHTLQEESFRGQEFIDHA
KPLKGNNDLLSITQSEIIYKIHKEYLTCGADIVETNTFSSTSIAQADYGLEHLAYRLNKV
SAEVARRAADDVTAETGMKRYVAGAMGPTNKTLSVSPSVERPDYRNVTFDELVDAYAEQA
RGLLDGGVDILLVETIFDTANAKAALFAIQKLFEEDYEPRPIFISGTIVDKSGRTLSGQT
GEAFVVSVSHAEPLCIGLNCALGAIEMRPFIEAIGKCTTSYVICYPNAGLPNTFGGYDET
PEVTAKHIKDFALDGLVNIVGGCCGTTPAHIREIAEAVKNCKPRIPPTSVFDGYMLLSGL
EPFRIGPYTNFVNIGERCNVAGSRRFAKLIMSDNYEEALSVAKAQVEMGAQILDINVDDG
MLDGPTAMARFCNYIASEPDIAKVPLCIDSSNFNVIEAGLKCCQGKCIVNSISLKEGEED
FLAKAKKIKQFGAAVVIMAFDEVGQATDTETKVSVCTRAYNLLVEKLNFNPNDIIFDPNI
LTIGTGMEEHDKYAINFIEATKSIKESLKGARVSGGLSNLSFSFRGMEAIREAMHGVFLY
HAIKAGMDMGIVNAGNLPVYDDIDKELLTLCEDLIWNRDPDGTEKLLKYAQTKAKGGKKV
IQTDEWRNGSVEERLEYALIKGIEKFVIEDTEEARANKEKYSRPLHIIEGPLMNGMKVVG
ELFGAGKMFLPQVIKSARVMKKSVGHLIPFMEKEREAMRAISGTLEEDNPYQGTIVLATV
KGDVHDIGKNIVGVVLGCNNFRVIDLGVMTPCDKILRAAIENKADIIGLSGLITPSLDEM
IFVAKEMERLGIRTPLLIGGATTSRTHTAVKIAPRYNAPVIHCLDASKSVVVCSQLLDEN
VRDDFLEEITEEYEDIRQDHYESLRERRYLTLEQARNKGLHIDWLSHPKPVRPKLIGTEV
YSNYDLEKLRHYIDWKPFFDVWQLRGKYPNRAFPKIFNDKTVGEEAKRLYEDAQNMLNMV
ISEKKFEARGVVGIWPAHSVQDDILLYADEGNMSSTEAIATFYGLRQQAEKDSASTDPYY
CLSDFIAPQHSGVKDYLGVFAVACFGVEELSKVYEKQGDDYSSIMAKALGDRLVEAFAEE
LHERVRKDLWGYCSEEQLNVSDLRRIRYEGIRPAPGYPSQPDHIEKVTMWKLADVERTTG
IKLTESLAMSPASSVSGLMFSSPMSKYFAVGKISKDQVEDYACRKNMPVCEVEKWLGPIL
SYDPED
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgccccccactatccagcatgcggagccttcaggtgttagaaagaggaacctgcaggaa
gagttggactcagttcttcgtgagagaatcatggttttggatggtggtatgggcaccatg
atccagcaacataccctgcaagaggaaagtttcagaggacaggagtttatagaccatgct
aaaccgttaaaggggaacaatgatctgctaagtatcacgcagtctgaaataatatacaag
attcacaaggaatatttgacttgcggagctgatattgtggaaacaaacacgtttagcagc
actagcattgcacaggcagactacggccttgagcacctggcgtaccgtttgaacaaagtt
tcggccgaagtagccaggcgagcagcagatgatgtgacagctgagacaggcatgaaaagg
tatgttgctggagccatgggtcctaccaacaagaccctgtctgtgtctccttcagtagaa
agaccagattatcggaatgtcacttttgatgagcttgtggatgcttatgcagagcaggca
aggggacttctggatggtggtgtagacattttgctggtagaaacaatatttgatacagcc
aatgccaaggcagcgctctttgctatccagaaactatttgaagaagactacgaaccaaga
cctatctttatttctgggaccattgtagataaaagtggacgaacactctctggacaaact
ggcgaagcttttgttgtaagcgtgtcccacgccgagccactttgtattgggttgaactgt
gctttgggtgctatcgaaatgaggcctttcattgaagccattgggaaatgtacaacatcc
tatgtcatctgttatccaaatgcaggtctccccaacacctttggtggttatgatgaaaca
cctgaagtcactgctaaacatataaaggattttgcattggatggcctggtgaatattgtc
ggtggttgctgcggaactacaccagctcacatcagagagatcgcagaggccgtcaagaac
tgtaaaccacgaattccccctacatcagtatttgatggttatatgctgctctcaggttta
gagccctttaggattggaccgtatactaattttgtgaatattggagagcgctgtaatgta
gccgggtcaagacgattcgccaagctaatcatgtcagacaattatgaggaggctctgagt
gttgccaaggctcaagtggaaatgggagctcagattctggatatcaatgtggatgatgga
atgctggatggcccaactgccatggccagattttgtaattatatagcgtcagagccagac
attgccaaggtacccttgtgtatcgactcttctaattttaatgtcatagaggctgggctg
aaatgctgtcaggggaaatgtattgtgaacagcatcagtctgaaagaaggggaggaagac
ttccttgcaaaggccaaaaaaatcaagcagtttggtgctgctgtggtgatcatggctttt
gatgaagtggggcaggccacagacacggaaactaaagtcagtgtgtgcacaagagcttat
aatcttctggttgagaagttgaatttcaaccccaatgacataatctttgacccaaacatc
ctaacaattggcactggcatggaagaacatgataaatatgctattaattttattgaagcc
accaaaagtattaaggaatctttgaaaggagcaagagtaagtgggggtctctccaatctt
tctttttcatttcgcggaatggaagctatcagagaagccatgcacggagtcttcctctac
catgccataaaggctggcatggatatgggcatagtgaacgctgggaacctaccagtttat
gatgatattgacaaagagctccttactctttgtgaagatctaatctggaacagagatcct
gatggaacagagaagctcttaaaatatgcacagacaaaggctaaaggtgggaagaaggtg
atccagactgatgagtggaggaacggctctgtagaggaaaggttggaatatgcacttatc
aagggcattgaaaaatttgttattgaagatacagaagaagcaagagcaaacaaggaaaaa
tactcaagacctctgcacatcattgaagggcctcttatgaatggcatgaaagtagttgga
gagctgtttggtgcagggaagatgtttttgcctcaggtgattaagtctgctcgtgtgatg
aagaagtctgtgggacatctgattcctttcatggagaaagaaagagaggcgatgagagcc
atatcgggcactctggaagaagataacccctatcaaggcacaattgtactggcgactgtt
aaaggggatgtgcatgacatcggcaagaatattgtaggagtagtgctggggtgcaataac
ttcagggtgattgatttaggtgtcatgacaccatgcgataagatactacgagctgccata
gaaaacaaagctgatataattggtctgtctggtctcatcactccatctctggatgaaatg
atttttgttgccaaggagatggaaagacttggtataagaacccctctactaattggtgga
gcaacaacatctcggacgcacactgctgtgaaaatagcacctcgatacaacgccccagtt
atccactgtttggatgcttctaagagtgtggtggtttgctctcagcttttagacgaaaat
gtcagagatgacttcttggaagaaataacagaagaatatgaagatattcgccaagatcac
tatgagtccctcagagaaagaagatatctgactttagaacaagccagaaataaaggactg
cacattgattggctttctcacccgaagccagtgcggccaaagttgattggaacagaggtg
tacagcaactatgatcttgagaaactacgtcactatattgactggaaacctttctttgat
gtgtggcagcttaggggcaaatacccaaacagagcatttcccaaaatatttaacgataag
acagtaggagaggaggcaaagagactctatgaagatgcccagaatatgctgaatatggtt
attagtgaaaagaagtttgaggccaggggggttgttggtatctggccagctcacagtgtg
caagatgacattctgttatatgcagatgaagggaatatgagttccacagaagccattgca
acgttttatggtttacggcagcaggcagagaaagactctgcatccactgacccatattac
tgcctctctgacttcatcgcccctcaacattctggggtgaaagactatttgggagtgttt
gctgtggcatgttttggggtggaagagctgagcaaagtgtatgagaaacaaggagatgac
tacagcagcatcatggccaaagcactgggagatcggctggttgaggcctttgcagaggaa
cttcacgagagagtccggaaagacttatggggttactgtagtgaggagcaactgaatgtg
tctgacttgcgcaggatacgctatgaaggcatccgaccagctcctggataccctagccag
ccagatcacatagaaaaagttaccatgtggaaactagcagatgttgaaagaacaacagga
atcaagctgacagagtctctggccatgtccccggcttcttcagtctctggtctaatgttc
tccagtcctatgtccaagtattttgctgtagggaaaatttccaaagatcaggtagaagat
tatgcttgcagaaaaaatatgcctgtgtgtgaagttgagaaatggttgggcccgattctg
agctatgatcctgaagactaa
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integrated database retrieval system
