Xenopus tropicalis (tropical clawed frog): 100490867
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Entry
100490867 CDS
T01011
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100490867 (cwc22)
Spliceosome [BR:
xtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100490867 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
100490867 (cwc22)
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
SSP160
Motif
Other DBs
NCBI-GeneID:
100490867
NCBI-ProteinID:
XP_002932080
Xenbase:
XB-GENE-1010539
UniProt:
A0A6I8PZ91
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Position
9:63085224..63138291
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AA seq
803 aa
AA seq
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MKSSVAQVKGANYDKVDTRSSSERSSSSEDSSQERSPSPRDRGYTNRARGYSDRDRYEDR
SRNGRHDRSDESRRRERERSSSPQDRGYNDRSRGYSDRDRYGDRSRNGRYDRSEDNRERE
RRRNDQDRDTERRSPPARRRSPPTRRSEERTEEQSQPEPPAKKKKEELDPILTRTGGAYI
PPARLRMMQEQITDKSSLAFQRMSWEALKKSINGLVNKVNVSNIGNIIQELLQENIVRGR
GLISRSVLQAQSASPIFTHVYSALVAIINSKFPNIGELILKRLILNFRKGYRRNDKQLCL
TASKFVAHLINQNVAHEVLALEMLTLLLERPTDDSVEVSIGFLKESGLKLTQVTPRGINA
IFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVIPDGLDLVEEEDQFTHMLPLED
DYNPEDVLNVFKMDPDFLENEEKYKTIKKEILDEGDSDSEGEDANEGSEDDSEEEEEDGG
EAGEEGEKMTIHDKTEINLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMI
LDCCAQQRTYEKFFGLLAGRFCSLKKEYLEAFENIFKEQYDTIHRLETNKLRNVAKMFAH
LLYTDSVPWSVLECINLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDITLQPFFQ
GLLPMDNPKNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQNVESSDSSDSSSGS
ESSSDSDSSSSSSSDSESSSSSSDSDTSRRKKHSQKKKSRETHKVASKKQAPDNRRKEIP
KQKHQKDKYEEKRSRKSQGDSNH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtagcgtggcccaagtcaaaggtgctaattatgacaaagtagatactcgtagc
tcttctgaaagaagttcctcatcagaggacagtagtcaagaaaggtctccttctccacgg
gacaggggatatactaatcgcgccaggggctactctgatagggaccgatatgaagatcga
tcaaggaatggacgacatgacagatcagatgaatcaaggcgtcgagaaagagagaggtcc
tcatcccctcaggacagaggttacaatgaccgtagcagaggttactctgaccgagatcga
tatggcgatcggtctaggaatgggagatacgatagatcagaggataacagagagcgagag
agaaggcgaaatgaccaagacagagacactgaaaggagatccccacctgcaagaaggaga
tctccacctacaagaagaagtgaagagcgtacagaagagcaaagccaacctgaacctcct
gctaagaaaaagaaagaagaattagatccaatcctcactcgcactggtggtgcttacatc
cctcctgcaaggctacgtatgatgcaagaacagatcacagataagagcagtttggccttt
cagagaatgagctgggaagctttaaaaaagtcaatcaatggtcttgttaacaaagtgaac
gtctccaatattgggaatatcatccaagagttgcttcaagaaaatattgttcgtggaaga
ggtcttatctctagatctgtgctgcaagctcaaagtgcctcccctatctttactcatgtc
tattcagcgttggttgcaatcatcaactcaaagtttcctaacattggagaactcatttta
aaaagactgatcctgaatttccgcaagggctacaggagaaatgacaagcaactttgcttg
accgcttcaaagtttgttgcccatcttatcaaccaaaacgtggcccatgaggtattggct
ttggaaatgctgactctgctgctggaaagacctacggatgacagcgttgaagtctctatt
ggctttttaaaggaaagtggacttaagctaacgcaagtaacaccccgtggtataaatgcc
atatttgagcgtcttcgtaacatcctgcacgagtcagaaatcgataagcgcgttcagtat
atgattgaagtcatgtttgctgttcgaaaggatggttttaaagatcatccggtaatccca
gacggcctggacctagtggaggaggaagaccaatttacacacatgcttcccttagaggac
gattacaacccagaggatgtgctcaatgttttcaagatggatccagattttctcgaaaat
gaagagaaatacaagaccattaaaaaagaaattcttgatgaaggagacagtgattctgaa
ggcgaggatgctaatgagggcagtgaagatgacagtgaagaggaggaggaggatggcgga
gaagctggagaagaaggagagaaaatgacaattcatgacaaaactgaaattaacttggtt
gctttccggcggacgatatatttggcaatccagtcaagtttagactttgaagaatgcgcg
cacaaattgataaagatggattttcccgagagccagacaaaagaactgtgcaacatgata
ctggattgctgtgctcagcagagaacgtatgagaagttctttggattgcttgcagggcgt
ttctgttcgttaaagaaagagtatttggaagcttttgagaacatctttaaagaacaatat
gatacaatccaccgactggaaaccaacaaattgcgaaacgttgccaagatgtttgcccat
ctcctgtacacagactccgttccttggagtgtgttggagtgtataaatctaagtgaagaa
acaaccacctcgtccagcagaatatttgtcaaaatatttttccaggagctgtgtgaatat
atggggctaccaaagctaaatgctagacttaaggacataacacttcagcctttctttcaa
ggattgctacctatggacaacccaaagaacacccgctttgctatcaacttttttacctcc
attggacttggcgggttaacggatgaactgcgtgaacacctgaagaatgctcctaaaatg
atcatgacccagaaacagaatgttgagtcgtcggattcttcagactcctcatcagggtcg
gagtcttcttctgactcggacagtagctccagttcttctagtgacagcgaatcatcaagc
tccagcagtgactcagatacatcaaggagaaaaaaacattcacaaaagaagaaaagtaga
gagacgcacaaagtggcttctaaaaaacaagctcctgacaacaggcgtaaagaaatcccc
aaacaaaaacaccagaaggacaaatatgaggaaaaacggtcaagaaaatctcaaggggac
tcaaatcactaa
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