KEGG   Xenopus tropicalis (western clawed frog): 100497898Help
Entry
100497898         CDS       T01011                                 

Gene name
wbscr17, galnt16, galnt20, galntl3
Definition
(RefSeq) Williams-Beuren syndrome chromosome region 17
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
xtr00512  Mucin type O-glycan biosynthesis
xtr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    100497898 (wbscr17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:xtr01003]
    100497898 (wbscr17)
Enzymes [BR:xtr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     100497898 (wbscr17)
Glycosyltransferases [BR:xtr01003]
 O-Glycan biosynthesis
  Mucin-type
   100497898 (wbscr17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 100497898
NCBI-ProteinID: XP_002935847
Xenbase: XB-GENE-6032437
LinkDB All DBs
Position
2
AA seq 598 aa AA seqDB search
MASLRRVKILLVLNLIAVAGFVLFLAKCRPITVKGGESFHEVHPRAEVTNFTNHASSPIQ
EAVLKRLALLEDIVYRQLNGLSKSLGLIEGYGGRGKGGVSATLSPDEVEKAKGPHEKYGY
NVYLSDKISLDRSIPDYRPTKCKTLTYPKELPQISIIFIFVNEALSVILRSVHSAVNHTP
VHLLKEIILVDDNSDEEELKGPLEEYVHKRYPGLVKVVRNQKREGLIRARIEGWKAATGQ
VTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDTFEVQRYENSAHGYSWELW
CMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVDRQFFGEIGLLDPGMDVYGGENIELGIK
VWLCGGSMEVLPCSRVAHIERKRKPYINNLDFYTKRNALRVAEVWMDDYKSHVYIAWNLP
MENPGIDIGDVSERIALRKSLKCKNFQWYLDNVYPEMRRYNNTVAYGELRNNKAKDVCLD
QGPPENHTAIMYPCHGWGPQLGRYTKEGYLQLGTLGSTNLLPDTRCVVDNKISKFPQLMD
CDKMKSTLQKRWSFIQNGAIMNRGTGRCLEVESRINGGIDVILRSCTGQRWTIKHIIK
NT seq 1797 nt NT seq  +upstreamnt  +downstreamnt
atggcttctctgagaagagtcaaaatcttgttggtgttaaacctgattgcagtagctgga
tttgttctatttttggccaagtgcagaccaattactgtgaaaggtggggaatcattccat
gaggtccatcccagggcagaagtgaccaactttacaaatcatgcaagcagccctattcaa
gaagccgtgctgaaaagactcgctcttctagaggacatagtctacaggcagctaaatggt
ttatccaaatcacttggtcttattgaaggttatgggggcagaggaaaaggtggggtttca
gctacactctctccagatgaagttgagaaagccaaaggaccacatgaaaagtatggctac
aatgtctacctcagtgacaagatttcactggacaggtctataccagattatagacccact
aagtgcaagacactgacctatcccaaggagctgcctcagatttcaattattttcatcttt
gtcaatgaagccctgtctgtgattctgagatcagtgcacagtgctgtgaaccacacaccg
gtccatctgttgaaggagattatccttgtggatgacaacagtgatgaagaagagttaaag
ggtcctttggaagaatatgttcacaagagatatccaggtttagttaaagttgtccgaaat
cagaaaagggaagggctgattcgagctcggatagaaggctggaaagccgctactggacaa
gtcactggtttttttgatgctcatgtagaattcactgctggctgggcagaaccagttctt
tctcggatacaagaaaacaggaaacgggttattttaccttcgatagataatatcaagcaa
gatacatttgaagtgcagagatatgagaattctgcccatggatacagctgggagctttgg
tgtatgtatattagtcctcctaaagactggtgggatgcaggagatccatccttaccaatc
agaacacctgcaatgattggatgctcttttgtggtggacaggcaattctttggggaaatt
ggtcttctagatccaggaatggatgtgtatgggggagagaatattgagctcggtatcaag
gtatggttgtgtggtggaagcatggaagttcttccatgttccagggttgctcacattgaa
cgtaagagaaaaccgtacattaacaacctggatttctacaccaagagaaatgcattacgg
gtagctgaagtctggatggatgattataaatcacatgtttatattgcgtggaacttacca
atggagaatccagggattgatattggagatgtatcagaaaggattgctttgagaaaaagc
ttaaaatgcaagaatttccagtggtacctggacaatgtttatccagaaatgcgacgctac
aataatactgttgcatatggggagctccggaacaacaaagcaaaagatgtttgtctagac
caaggcccaccagaaaatcatacagctattatgtacccatgccacggatggggtcctcag
cttggaagatatacgaaagaaggatacttacaactgggtacacttgggagcacaaatctt
ttgcctgatactcgctgcgtagtagacaacaaaataagcaaattcccccaacttatggac
tgtgataagatgaaaagcacactccaaaaacgctggagctttatacagaatggagcaata
atgaacagaggaacaggacgatgtttagaagttgaaagtagaatcaacggcggcattgac
gtaatccttcggagttgtacaggtcaaagatggacaattaaacacattatcaaatag

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