KEGG   Xenopus tropicalis (tropical clawed frog): 101734662
Entry
101734662         CDS       T01011                                 
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
  KO
K03172  TNF receptor-associated factor 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    101734662 (traf1)
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF zf-C3HC4 Cast Crescentin Cortex-I_coil TRAF2_zf TRAF3_RING zf-C3HC4_2 SlyX zf_UBZ MRPL52 Macoilin
Other DBs
NCBI-GeneID: 101734662
NCBI-ProteinID: XP_031747100
UniProt: A0A803K2D0
LinkDB
Position
8:complement(8551387..8566457)
AA seq 549 aa
MPRTMFKLEANLSSVPVENEFVFGYPTTICDVAPGEKYLCCSCKNVLKKAQQTLCGHRYC
TPCLVWIVSRNHDLCPKCKAEDPTTLSDDSLLKEERAFSDAAINKEISELKVHCVIPGCT
WRGLMRDYEEHESLCNYALIPCHTGCGHRVMRKQLADHLESECPNNTIKCPKCTQHFSSN
EFPKHRCEKGPTDDQSHRKTDQSAKGKNGNSHSKKEKCHFTPLGCTYVGSREKIKEHYRT
SAAAHLSLVCPLILRIKDNLTNTEGKKNGFYVPLADSTDGPGQKNPFSLQAEDFKAGNGD
LELDCGHAVGQPSDEVANRLSLLETRLQVFENIISVLSKEIDSSQSQLAAIKEQKAEEER
KVKALEHKVENLRCTLAMKDIVLNELEMRSACLEQTSYDGVFLWKISDLTNKSHDAVTGR
AISLYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTF
VLVDHNNRDSVFDAFRPDVTSASFQRPINDMNVASGCPLFCPIAKLNSPKHAYIRENTLY
IRCIIDTNS
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgccacggaccatgtttaaactggaggcgaatctgagctcggttcccgtcgagaatgag
tttgtgtttggctacccgacgactatctgcgacgttgcacccggggagaaatatctctgc
tgcagctgcaagaatgttctaaagaaagcgcaacaaacactgtgcggccacagatactgc
accccctgtctggtgtggatagtaagcagaaatcatgacctgtgccctaaatgtaaagca
gaagatcctacaactttaagtgacgacagtctgttaaaggaagagcgggcttttagtgat
gcagcgatcaataaggaaatttcggaactcaaagttcactgtgtgatcccaggatgcacc
tggagggggctcatgagagactacgaggagcatgagagcttgtgcaactacgccttgata
ccctgccacaccggctgcgggcaccgggtcatgaggaagcagctggccgaccacttggaa
agcgaatgccccaataacactattaagtgccccaaatgcacccagcacttttccagtaac
gagtttccaaaacacagatgtgagaagggcccgacggatgaccaaagccaccgaaaaact
gaccaatcggcgaaaggaaagaatgggaattctcattccaaaaaggaaaaatgccacttt
acgccacttggctgcacttatgtggggagcagagaaaaaatcaaggagcactataggacc
tccgccgcagcccatctctctctggtgtgcccgctcatattgagaataaaggataactta
accaacactgaagggaagaaaaatggattttatgtgccgcttgcagactctacagatggt
cctggtcagaagaacccatttagccttcaggctgaggactttaaagcaggaaatggagat
cttgagttggactgtgggcatgctgtgggtcagccaagtgatgaggtggcaaaccggctc
tcactcctggaaactcgactgcaggtatttgagaatatcatatctgtgctcagcaaggag
attgacagctctcagtcccagttggctgccattaaggagcagaaggcagaagaagagaga
aaggtcaaagccttggaacacaaggttgaaaacttacgctgcactttggccatgaaggac
attgtgctgaatgaactggagatgcgctccgcctgtttggagcaaacctcgtacgacgga
gtctttctatggaaaatctcagacctgaccaataaaagtcacgacgcggtcacgggaaga
gccatcagtctgtattccccagctttctacacggccaaatatggctacaaagtgtgccta
cggatttatctgaatggagacggagcagggaaggggactcatgtctctctgttttttact
gtcatgaaaggggaatatgatgcccttctaccctggccattcaaacataaggtcaccttt
gtgcttgtggaccacaacaaccgagacagcgtgtttgacgccttccgcccagacgtcaca
tccgcctcattccagcgcccaatcaacgacatgaacgtggccagcggctgccccttattt
tgccccattgccaaactgaactcccccaaacacgcctacatcagagagaacaccctgtac
attcgatgtatcatcgacaccaattcctag

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