Xenopus tropicalis (tropical clawed frog): 448343
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Entry
448343 CDS
T01011
Symbol
cldn5
Name
(RefSeq) claudin-5
KO
K06087
claudin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
448343 (cldn5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
448343 (cldn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
448343 (cldn5)
04147 Exosome [BR:
xtr04147
]
448343 (cldn5)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
448343 (cldn5)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
448343 (cldn5)
Exosomal proteins of colorectal cancer cells
448343 (cldn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
448343
NCBI-ProteinID:
NP_001006707
Xenbase:
XB-GENE-976044
UniProt:
F6TD70
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All DBs
Position
1:complement(154287740..154290301)
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AA seq
216 aa
AA seq
DB search
MASAAIEILGLSLSILGWVGVILACGLPMWQVSAFIENNIVVAQIIWEGLWMSCVVQSTG
QMQCKVYDSILALSQELQAGRALTVMASIVGLIGLLVTIVGAKCTNCLQGNSAKGRVLLA
GGVIYILCGILVLIPLCWIANIIITEFYDPRVPASQKREMGAALYVGWAATALLLLGGSL
LCCSFAMKDGISNLPVKYSAPRMPTSNGDYDKKNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcagcgatcgagatccttggtctgtccctgagcatcctaggctgggtgggg
gtgatcctggcttgcgggctcccaatgtggcaagtgtcagcctttatagaaaataacata
gtggtggcgcaaattatctgggaagggctgtggatgtcctgcgtggtgcaaagcacggga
cagatgcagtgcaaagtatatgactccatccttgcccttagccaagagcttcaggctggc
agagccctcaccgtcatggcctccatagtggggctcatcgggctgcttgtgaccatcgtg
ggtgccaagtgcactaactgcctgcaagggaacagcgcgaagggccgggtgctgctggcc
gggggtgtcatctacattctgtgcgggatcctggtcctcatcccgctctgttggatcgcc
aatatcatcattaccgagttctacgacccccgggtgccggcctcccagaagcgagagatg
ggggcagctctgtatgtggggtgggctgccactgcgctgctcctgctggggggctcccta
ctgtgctgctcattcgccatgaaggatggaatcagcaatctgccggttaagtactctgcg
ccccgcatgcccacctccaatggggactatgataaaaagaactacgtgtag
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