Xenopus tropicalis (tropical clawed frog): 549006
Help
Entry
549006 CDS
T01011
Symbol
sod1
Name
(RefSeq) superoxide dismutase [Cu-Zn]
KO
K04565
superoxide dismutase, Cu-Zn family [EC:
1.15.1.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
549006 (sod1)
Enzymes [BR:
xtr01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
549006 (sod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sod_Cu
Motif
Other DBs
NCBI-GeneID:
549006
NCBI-ProteinID:
NP_001016252
Xenbase:
XB-GENE-1006488
UniProt:
Q0IIW3
LinkDB
All DBs
Position
2:complement(15646838..15651339)
Genome browser
AA seq
151 aa
AA seq
DB search
MVRAVCVLAGSGDVKGVVHFQQQDEGPVTVEGKIYGLTDGKHGFHIHEFGDNTNGCISAG
PHFNPESKTHGAPEDAVRHVGDLGNVTAKDGVAEFKLTDSLISLKGNHSIIGRCAVVHEK
EDDLGKGGNDESLKTGNAGGRLACGVIGLCQ
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggcggtgtgtgtgctggcgggaagcggcgacgtgaagggggtggtgcacttc
cagcaacaggacgaaggcccagtgacagttgaagggaagatttacggcctgactgacgga
aagcacggcttccatatccatgagtttggcgacaacaccaacggctgtatcagcgcgggc
cctcatttcaacccagagagcaagactcacggggccccagaagatgcagtcaggcacgtc
ggggatcttggcaatgtgacggccaaagatggcgtggcggagttcaaattgacagattcc
ctcatttcactgaaaggcaatcactcgatcattggccgctgtgctgtggtccacgagaag
gaagatgacttgggcaaaggaggcaacgatgagagtctgaaaactggcaatgccggtggg
cgcctggcttgtggcgtgattggcttatgccagtga
DBGET
integrated database retrieval system
