Xenopus tropicalis (tropical clawed frog): 733934
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Entry
733934 CDS
T01011
Symbol
u2af1
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
733934 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
733934 (u2af1)
Spliceosome [BR:
xtr03041
]
Complex A
U2 snRNP components
U2 related factors
733934 (u2af1)
Complex B
733934 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
733934
NCBI-ProteinID:
NP_001039113
Xenbase:
XB-GENE-877053
UniProt:
Q28C63
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All DBs
Position
2:complement(1499179..1505315)
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AA seq
243 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGGGGRDRDRRRSRDRERS
GRF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccatcttcggtaccgagaaggacaaggttaactgctcattt
tactttaagattggagcatgtcgccatggagaccgatgctcccgacttcacaacaagccc
accttcagtcagactatcgctctgctgaacatttaccggaacccacagaattcctcccag
tcggcagatggacttcgctgtgctgtgagcgatgtggagatgcaggaacattatgacgag
ttcttcgaggaggtatttacagagatggaggagaagtacggggaggtggaggaaatgaac
gtgtgcgacaacttgggagaccacctggtggggaacgtctatgtcaagttccgccgagag
gaagacgctgagaaggctgtgaaggatctgaacaaccgttggtttaacgggcagccaatc
cacgccgagctgtcccccgtcactgactttagggaggcctgctgccgccagtatgagatg
ggggagtgcacgcgcggggggttctgcaacttcatgcatctgaaaccaatctctcgagag
ctgcgcagggagttgtacggccgccgaaggaagaaatcccgggaacgtcgctctcgctcc
agagaccgcggcaggggaggcggtggtggtggcggaggaggcggcggcggtggtggcgga
ggaggcggcggtggcggcagagacagggaccggagaagatcaagagaccgcgagaggtcg
ggtcgcttttga
DBGET
integrated database retrieval system