Xenopus tropicalis (tropical clawed frog): 780106
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Entry
780106 CDS
T01011
Symbol
setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
780106 (setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
780106 (setd1b)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
780106 (setd1b)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
780106 (setd1b)
HMT complexes
COMPASS/SET1 complex
780106 (setd1b)
COMPASS/SET1 complex (yeast)
780106 (setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
SGP
RRM_5
Motif
Other DBs
NCBI-GeneID:
780106
NCBI-ProteinID:
NP_001072649
Xenbase:
XB-GENE-5842344
UniProt:
Q08D57
LinkDB
All DBs
Position
1:complement(162133468..162159700)
Genome browser
AA seq
1956 aa
AA seq
DB search
MSFKEAKPGERGKNPEDHGRKQTASWINGMEAGNQPSTSGEKKSHHWRSYKLIIDPALRK
GQHKLYRYDGLSFSMPNSGVPPVDSVRDPRIGRIWTKTKELDLPVPKLKIDEFYVGPVPP
KQVTFAKLNDNIRENFLGDMCKKYGEVEEVEILYNPKNKKHLGIAKVIFASVKGARDAVK
HLHNTSVMGNIIHVELDTKGETRMRFYDLLVNGFYTPQTLPVGSDLDASPTVNETPQVVE
SVKRTKETAIGPSVTPNSSTPFSHDTAYSSSRQGTPNSYSQFTPQSQGTPHTPRLGTPFS
QDSSYSSRQTTPAFHYGQDSGFKPRRHENKFTDAYNRRPGHHYVHSSGSYRGTEHTFNVT
RPQPEPVQVPRTPPLSHSSGNYKSAFSPYQGNTVFPQTDESQYPQTSRDMEYRRTGPQTS
DSYSDAGCNSASLELKPVKEKPEEPPPPEPDSTTEQKASFSQTPERCETPGTPTLEAELQ
HNSLDTRIAMLLKEQRTQLHLIAGDQNSDNEIRMEGSPISSSSSQLSPIPPYSSGSRYQD
VTPSSRPSSTGLEDISPTPLPDSDDDDEPIPGTASLCQNSRSASPIDQINQSGRKTESLD
KKELVAGDETPTSEKMDEGHPSSGEDMEISDDEVTPSPITSAECAITSSSVISSVIPIPP
PGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPSVTVPPPPLPAPPGVPPHHILHHPPPYHH
FPVMQGEMMNVLGNHWGGMTMSFQMQTQMLSRMMQGQGSYPYHHFMGGSMQFGNQHPYRP
FAISAHLTRGQPWPPFPKFDPSVPPPGYEHKKEDPHKATVDGVLQVIVKELKAIMKRDLN
RKMVEVVAFRAFDEWWDKKERLAKQSLTPVKSGESKEEDKQKTKEHITSSLLESWNKGEG
LGFEGIGLGIGLRGAIRLPSFKVKRKEPPDAALAGDQKRIRPSHSVDDEDEESERDRDIS
STASDLSKKDADAVNNRRRPARPLDSEGEEEVESEGDDGETSDKEDSSSEKEDQDDGSVS
ALSSKKQLYGDKEGDDEDDDTQSSGKEEDLVSEEEDTTSVASSRAEMDSSDESEESSEYE
SSSDSDEKEEEDDEEEELVFGDDQSEDQDLGQEYEVETDREEDFFRENLSECSSLPKAGD
VELEDEMQKVEEDVARQTTQETLHLRKKNLDVPLVESKECKQDTLDKVEKLFAVPMQEEV
FKEHEKAPSPMNEEEEYIELQLEPVPLVPEGAAPAAQEPVIIRPLTPTGAFGETGPVLKL
EEPKLQVNLTQFATEDEELYPRTPGRDTAAHSDTEVTFQPGLKVAPSSLPFLPSHNKEEE
CLLPPEKHAGHLTVTKMLSEEDLPRTPGRDIVVKSSHLGKSQSTETVPATPGSDAPLTGS
SLTLTSPHIPGSPFSYLSQSPGIINSGIPRTPGRDFNFTPTFPESNSIFPCHPSGKKPSV
DEPDEKSFKEPTSASLTMNSVPSPIPFASPPRGLPHMDIRLGADDLESSDTPAYLSDKLL
SEESECEFTKVHLTSTDESAPSPPLPPAEKRKGDRSKKPLSAHEFETEKNYETSSAVAMS
EGALGKQMFIGQPDAVSGIKDPAAVPLDFRNDSLSENTVHEPIIQKVPLKELENQWNEVL
KEEEDITKHKKSRNSRHNNRYDEFSTVPSPEFSPPRAMFKPRSEFEEMTILYDIWNGGID
DEDIKYMCITYDRLLQQDNGMDWLNDTLWVYHPSTSVYSPKKKKRDDGLREHVTGCARSE
GYYKIDKKDKLKYLINNRSLTEELPIDTQGKSIPAQPQASTRAGSERRSEQRRLLSSFTG
SCDSDLLKFNQLKFRKKKLRFCKSHIHDWGLFAMEPIIADEMVIEYVGQNIRQVIADMRE
KRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSK
QYINVNEEITYDYKFPIEDVKIPCLCGAENCRGTLN
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaggaggccaagcctggggagagaggcaagaacccagaagaccatggcaga
aagcagactgcaagctggatcaacgggatggaggcaggcaaccagcccagtacttcgggc
gagaagaagagtcaccattggcggagttacaagttgatcattgaccctgctctgaggaag
gggcagcacaaactctatcgttacgatgggctcagctttagcatgcctaactccggggtc
ccccctgtggattcagtaagagatccccggatcggacgtatatggaccaaaactaaagag
ttggatttgcctgtccccaaacttaagatcgatgagttttatgtggggccagtgcccccc
aagcaggtgacgtttgccaaactaaacgataacatccgcgaaaacttcctgggggacatg
tgcaagaaatacggggaggtggaggaggtggagatcctttataaccccaaaaataaaaaa
cacctgggcattgccaaagtcatattcgccagcgtgaagggcgccagggacgcggtgaaa
cacttgcacaacacctcggtcatgggcaacatcattcacgttgagctggacacgaaaggg
gaaacgcgtatgcgcttctatgaccttttggttaatggtttctatactcctcagactctt
ccagttggaagtgatttggatgcctctcccactgtgaatgaaacaccacaggttgtcgag
tcagtgaaacgtaccaaggagactgccattggtccatcagttaccccaaatagcagtact
ccattttcccatgatacagcctattcaagctctcgacaaggtacacctaattcttacagc
cagtttacaccacagtcgcaagggactcctcatactccccgcttgggaacccctttctcg
caggattccagttattccagtcggcaaacaacaccagcttttcattatggacaagactct
ggttttaaaccaaggagacatgaaaataagtttacggacgcttacaatagaagaccaggc
caccactatgtacacagttctggatcctaccgggggactgaacacacatttaatgtgacc
agacctcaaccagaacctgtgcaggttccccgcacaccacctttgagtcattctagcggg
aattataaatccgcattttcaccttatcaaggaaatactgttttccctcaaacagatgag
agccagtatcctcagacatcaagggatatggagtacagaaggacagggcctcagacgtca
gactcctattctgacgcagggtgtaactctgccagtttagaactgaaaccagtaaaggag
aaaccagaggaaccaccacctccggaacctgactcaaccacagagcaaaaagcatcattt
tcccagaccccagagaggtgtgagacacctggaactccaactctggaggctgaactgcag
cacaacagtttggatacacgaattgcaatgctattaaaagagcaaaggacccagctgcat
ttaattgctggtgatcaaaattcagacaatgaaataaggatggagggaagtccaatatca
tcctcctcctctcagctctccccaatccctccttatagttcaggctcccgttaccaggat
gttaccccttcatcacggccctcaagcacaggattagaagatattagtccaacccctttg
ccagattctgatgatgacgatgagccgattcctggcactgcctcactctgtcagaactca
aggtcagcatctcccatagaccagattaatcagtctgggcgaaaaactgagagtttggat
aagaaggaacttgtagcaggtgatgaaaccccaacatctgagaaaatggatgagggtcat
ccttcctcgggagaggacatggagatctcagatgatgaagttaccccttctccaataaca
agtgcagagtgtgccataaccagttcctctgtcatttcctcagtcattcctattccacca
cctgggtttccccctctgccaccgccacctcctccacagcctggatttcccatgccacct
cctttaccccctccaccgcctcctactcatccatcagtaacagtaccaccacctccattg
cctgcaccacctggggtgcctccacatcacatattgcaccatccacctccatatcatcat
ttccctgtgatgcaaggagaaatgatgaatgtccttgggaatcattggggtgggatgaca
atgtccttccaaatgcaaactcaaatgctcagccgcatgatgcaagggcagggttcttac
ccctaccaccatttcatgggaggctccatgcagtttggtaaccagcatccttatcgcccc
tttgctatatctgcacaccttaccagaggacagccctggccaccctttccaaagtttgat
ccatctgtaccaccaccaggctacgagcacaaaaaggaggaccctcacaaagcaacagtg
gatggagtcctgcaagttattgtcaaggaactgaaagctataatgaaaagagatctgaac
cgcaaaatggttgaggtggtggcttttagggcatttgatgaatggtgggataagaaggag
cgtttggcaaagcagtccttaacacctgtgaaatctggggagagcaaagaagaagataaa
caaaagacaaaggagcatataacttccagcctcttggaaagctggaacaaaggggaagga
ttaggttttgagggcattggactgggcattggtctgcgtggtgcaatccgacttccctct
ttcaaggtaaagcggaaagaacctcctgacgcggcactggctggagatcagaagaggatt
cgcccatctcattcagtagatgatgaggatgaagagtctgaaagagatcgagatatctct
agtacagcatctgacttatcaaagaaagatgcagatgcagtaaacaaccgaagaaggcca
gcaagacccttggatagtgaaggggaagaagaggttgaaagtgaaggggatgatggggag
acgtcagataaagaagactcctcttctgagaaagaggaccaagatgatggttctgtgtca
gctttgtccagtaaaaaacagctgtatggggataaagagggtgatgacgaagatgatgat
acacaaagcagtgggaaagaagaggatcttgtttcagaagaagaagataccaccagtgta
gcttcctctagagccgagatggattcttctgatgaaagtgaggaatcttcagagtatgag
tcaagctcggattcagatgaaaaagaggaggaagatgatgaagaagaagaactagtcttt
ggggacgatcaatctgaagatcaagatttaggacaggaatatgaagttgaaactgatagg
gaagaagatttcttcagagagaatttgtctgaatgtagtagtctaccaaaggcaggagat
gtggaattagaagatgaaatgcaaaaagtagaggaagatgttgcacggcaaacaacacaa
gagacattacatctgagaaagaaaaatctggatgtaccactggtggagtctaaagaatgc
aaacaggataccttagataaagtggagaagctctttgcagtacccatgcaagaggaagtt
tttaaggagcatgaaaaagcaccatcaccaatgaatgaagaggaagagtatatagagctt
caattagaacctgtgcctttggttccagaaggtgcagctccagctgcacaagagcctgtg
atcatccgtcccttaacaccaactggtgcttttggtgagactggtcctgttctcaagctt
gaagaacccaaactgcaagttaatttaactcagtttgccacagaagatgaagaactgtac
cctcgcacacctggccgggacacggctgctcattcagatacagaggtcacttttcagcct
ggtttgaaagtagccccatccagcctaccttttttgccaagccacaataaggaagaggag
tgtctgcttccacctgaaaagcatgccggtcatttaacggtgactaagatgctgtcggag
gaagatctgccccgtaccccaggcagagatattgtggttaagtcctcccaccttgggaag
tctcagagtactgagacagttcctgctacgcctggtagtgatgctcccctcacaggtagc
agccttacactgacttccccacacatacctggcagtcctttttcgtatctctcacagtca
ccaggaataattaacagtggtattccacggacacctggaagagattttaacttcactcca
acctttccagaatcaaattcaatattcccttgccacccttctggcaagaaaccctctgtg
gatgaaccagatgaaaagtcattcaaagaaccaaccagtgcttccttaacaatgaacagt
gttccttcacccatcccatttgctagcccgcctagagggcttcctcacatggacataagg
ttaggggcagatgatctggaatcatctgatactccagcatacctttccgataaattatta
agtgaggagagtgaatgtgaatttactaaagtgcacctgacttccactgatgaatctgca
ccatcaccacctctccctcctgcagagaagaggaaaggagacagatccaaaaaacctctt
tctgctcatgaattcgagactgagaaaaactatgaaacttcttctgctgttgccatgtca
gaaggtgctttgggtaaacagatgtttattggacaacctgatgcagtcagtggtattaaa
gatccagcagctgtaccgctagactttaggaatgatagcctctctgaaaacacagttcac
gagcccattattcaaaaagtccctttaaaagagctggaaaatcagtggaatgaagtttta
aaagaggaggaggatataactaaacataaaaaatcaaggaactccaggcataacaataga
tatgatgagttttcaactgtaccttctcccgaattttccccaccccgagctatgtttaaa
cctcgctctgaatttgaggagatgaccattctttatgatatatggaatggaggaatagat
gatgaagatatcaaatacatgtgcattacatatgatagactgttacagcaagataatggc
atggactggctcaatgacacattatgggtctaccacccttcaaccagtgtttattccccc
aagaagaagaagcgagatgatggtttacgggagcatgtaacaggatgtgctcgtagcgag
ggatattataaaattgataagaaagacaaacttaaatacctcatcaacaaccgttctttg
actgaagaacttcccatcgatacccagggaaagagtatcccagctcagcctcaagcctcc
acccgagcgggctcggaaagaaggtcagaacagcgcagactgctctcttccttcactgga
agctgtgacagcgacttgctcaaattcaatcagctgaagttccgaaagaagaagttgcgt
ttctgcaagagccatattcacgactggggtctttttgccatggaaccaattatagctgat
gagatggttattgagtatgtgggacaaaatattagacaggtaattgccgatatgcgggag
aagcgatatgaggatgaaggaatcggcagcagttacatgtttagggtggaccacgacacc
atcattgatgcgactaagtgtgggaattttgcacgatttattaaccacagctgtaatcct
aattgctatgcaaaggttattactgtggagtctcagaagaagattgtgatctactccaaa
cagtatatcaatgtgaatgaagagataacatacgattacaagtttcctatagaagacgtg
aagatcccttgtctttgtggagcagagaactgcagagggacgctaaattag
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integrated database retrieval system