Xylella taiwanensis: AB672_00195
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Entry
AB672_00195 CDS
T05568
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03420
Nucleotide excision repair
xtw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB672_00195 (uvrD)
03430 Mismatch repair
AB672_00195 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_00195 (uvrD)
Enzymes [BR:
xtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB672_00195 (uvrD)
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB672_00195 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB672_00195 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AXI82510
UniProt:
Z9JG62
LinkDB
All DBs
Position
complement(51439..53625)
Genome browser
AA seq
728 aa
AA seq
DB search
MNVSHVLDHLNQDQREAVSAAPGHYLVLAGAGSGKTRVLTHRIVWLNEVHGIPTHSMMAV
TFTNKAAGEIQQRVDVQLRHGKRGMWIGTFHSLAHRLLRLHWKDAKLPEGFQVIDSDDQL
RLVKRVIQSLELNDTLFPPKQAMWWINTQKDEGRRPEHIQPESHDNWIETQRRIYATYQE
RCNRAGLVDFAELLLRAHELLRDTPALLAHYRARFGEILIDEFQDTNTIQYAFVRVLADE
TGHVFAVGDDDQAIYGWRGAKVENVQHFLKDFPSVQIIRLEQNYRSSANILGAANAIIAH
NPDRIGKRLWTESGDGESIDLYAAYNEIDEARYVIERARQWVRDGGSYGEIAVLYRSNAQ
SRAFEEALQSEHIPYRVYGGMRFFERAEIKDALAYLRLLANRSDDAAFERVVNTPARGIG
ERTLDEVRRLARTQSLALWDAAMACTQASTLSTRARNALAGFLNLVQQLALETSQMRLAE
RIDHMLLRSELREHWRKEGRGGLDSESRQENLDELVSVASRFVLPESDAEEVTMTELDAF
LSYASLEGGDGQVQAGEEGVQLMTLHSAKGLEFPLVFLVGLENGLFPSARSLDEHGRLEE
ERRLAYVGITRARHKLILSYAEARRIHGQDNYNVPSRFLREIPQDLLHEVRPSIQVLRQA
SLGAVHRPVHNERDTASIKLGVNVMHPTFGSGVVVDYEGSGAHTRVQVKFDTVGTKWLVM
AYANLSVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtctctcatgtgctcgatcacctgaaccaggaccagcgtgaagccgtttccgcg
gctcccggccactaccttgtcctcgccggtgccgggtcagggaaaacccgcgtcctgacg
catcgcatcgtttggctcaacgaggtgcatggaatcccgacccacagcatgatggccgtc
acgttcactaataaggcggctggcgaaatacagcagcgtgtcgatgtgcaactgcgccac
gggaaacgcggtatgtggatcgggacgttccatagcttggcgcatcgattgctgcgcctg
cattggaaagacgcaaagctgcccgaaggcttccaggtcatcgacagcgatgatcaattg
cgcttggtcaagcgggtcatccagtccttggaattgaatgacactctgttcccacctaag
caggcgatgtggtggattaatactcagaaggatgaaggacgccgtcctgaacacatccaa
cccgagtcacatgacaactggattgagacgcagcgccggatctatgccacctatcaggag
cgttgcaaccgtgccggtttagttgattttgccgaactgctgctgcgagcccatgagctg
ctgcgcgatacaccggcactgctagcacactaccgtgcacgcttcggtgaaattctgatc
gacgaattccaggataccaacaccatccagtacgcgtttgtgcgggtgctggccgatgag
actggccacgtgttcgccgtcggcgatgacgaccaggccatttacggctggcgtggcgcc
aaagttgagaatgtgcagcacttcctgaaggattttccaagcgtgcagatcatccggctg
gagcaaaattaccgctccagtgccaatatccttggtgctgccaacgccatcatcgcgcat
aacccggaccggattgggaagcggctgtggactgaatccggtgatggtgaatccatcgac
ctgtacgccgcctacaacgagattgatgaagcccgctacgtgatcgagcgcgcgcgccaa
tgggtgcgcgacggcggcagctacggcgagatagcggtgctttaccgtagtaacgcccag
tcccgcgcgttcgaggaagcgctgcaatccgaacacatcccttaccgtgtgtacggtggc
atgcgtttcttcgagcgtgccgaaatcaaggatgcactggcctacctgcgcctgcttgcc
aatcgcagcgacgacgcggcattcgagcgtgttgtgaatacccccgcacgtggtatcggt
gagcgcaccttggatgaagtgcgccgcctggcacgtactcaaagtctcgcgttatgggac
gcggcgatggcatgtactcaagcatccacgctaagtacacgggcacgtaacgctttggcg
gggtttctcaatttagtgcagcaacttgcgctggaaaccagtcaaatgcgtttagccgaa
cggatcgaccatatgctactgcgttcggagttacgcgagcactggagaaaagaaggacgt
ggtggtctggactcggaatcacgtcaagaaaacttagacgagcttgtttcggtcgcttca
cgctttgtacttccggaaagtgacgcagaagaagtcaccatgacggaattggatgccttt
ctatcctatgcgtcgctggagggtggtgatggtcaagtccaggccggcgaggaaggtgtg
cagttgatgaccctgcactcggcaaaaggtttggagtttccactggtcttcttggtgggc
ttagaaaatgggttattcccgagcgcgcgttccctggacgaacacggccgcctggaagaa
gagcgccgcctagcgtatgtcggcatcacccgcgcccgtcacaaactcatcctcagctat
gccgaagcacgccgaatccacggtcaggataactacaacgtgccttcgcgctttttgcgc
gagatcccgcaagatctattgcatgaggtacgtcccagcatccaggttttgcgccaggct
tcattgggggcagtacatcgtccggtccacaatgaacgcgacacggcatcgatcaagctt
ggcgtgaacgtcatgcaccctacatttggcagcggcgtggttgttgattacgaaggcagc
ggtgcgcacacccgtgtacaagtcaaattcgacacagtcggtacaaaatggctggtgatg
gcatacgccaatctcagcgtggtatag
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integrated database retrieval system
